Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 SNORA36B-201ENST00000410438 131 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 RNU2-14P-201ENST00000411053 191 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 RNU7-141P-201ENST00000459304 62 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 SCARNA8-201ENST00000515924 131 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 RNU7-110P-201ENST00000516891 62 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 MIR4804-201ENST00000581683 73 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 MIR4676-201ENST00000583078 72 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 AC020891.4-201ENST00000605745 93 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 AC011373.1-201ENST00000607270 237 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 uc_338.4-201ENST00000616635 176 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 MTND4LP32-201ENST00000636111 270 ntBASIC0.28□□□□□ -2.36
RPRD1AQ96P16 Y_RNA.205-201ENST00000364128 113 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 RNU4-50P-201ENST00000364361 141 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 RNU6-1040P-201ENST00000383974 107 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 SNORD116-29-201ENST00000384516 83 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.27□□□□□ -2.37
RPRD1AQ96P16 AC010655.3-201ENST00000478818 450 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 AC005357.1-201ENST00000588399 301 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.772-201ENST00000606692 102 ntBASIC0.27□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.458-201ENST00000384240 102 ntBASIC0.26□□□□□ -2.37
RPRD1AQ96P16 RNU4-30P-201ENST00000410245 143 ntBASIC0.26□□□□□ -2.37
RPRD1AQ96P16 RNU2-70P-201ENST00000410718 179 ntBASIC0.26□□□□□ -2.37
RPRD1AQ96P16 BTF3P11-201ENST00000426582 477 ntBASIC0.26□□□□□ -2.37
RPRD1AQ96P16 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.26□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.259-201ENST00000364619 101 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 RNY4P36-201ENST00000391116 96 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 AC091959.1-201ENST00000495857 238 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 RNU7-25P-201ENST00000516544 62 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 AC092794.1-201ENST00000612734 582 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 uc_338.6-201ENST00000613544 171 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
RPRD1AQ96P16 RNU6-801P-201ENST00000364087 105 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.248-201ENST00000364501 109 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 SNORA72.4-201ENST00000384174 132 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.463-201ENST00000384271 102 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 RNU6-937P-201ENST00000384325 106 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.551-201ENST00000384661 102 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.24□□□□□ -2.37
RPRD1AQ96P16 RNU7-56P-201ENST00000458744 62 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 RNU7-62P-201ENST00000458856 62 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 AC025253.1-201ENST00000613623 543 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.24□□□□□ -2.37
RPRD1AQ96P16 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 RNU4-80P-201ENST00000363200 141 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.428-201ENST00000384078 102 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 SNORA24-201ENST00000384096 131 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.494-201ENST00000384432 111 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.496-201ENST00000384444 101 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.547-201ENST00000384654 119 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
RPRD1AQ96P16 snoU13.16-201ENST00000459350 104 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 SNORA18.4-201ENST00000516440 124 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 RNU6-1007P-201ENST00000516586 107 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 SNORD116.3-201ENST00000517176 78 ntBASIC0.23□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.242-201ENST00000364473 110 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 SNORD63-201ENST00000384262 68 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 SNORA26.5-201ENST00000391215 123 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 MTND1P14-201ENST00000427400 950 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 RNU6-277P-201ENST00000516272 106 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 Y_RNA.718-201ENST00000517110 102 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 MIR4514-201ENST00000581410 57 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 AL121655.1-201ENST00000605811 308 ntBASIC0.22□□□□□ -2.37
RPRD1AQ96P16 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.22□□□□□ -2.37
RPRD1AQ96P16 RNA5SP517-201ENST00000364724 117 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 Y_RNA.383-201ENST00000383855 97 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 Y_RNA.387-201ENST00000383918 102 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 RNU6-21P-201ENST00000384710 107 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 MIR548O-201ENST00000408583 114 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.21□□□□□ -2.38
RPRD1AQ96P16 AC134878.1-201ENST00000619901 243 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 AC104985.2-201ENST00000620598 500 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
RPRD1AQ96P16 MIR330-201ENST00000362196 94 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 MIR938-201ENST00000401216 83 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 AL358176.2-201ENST00000425769 204 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 AC236972.2-201ENST00000434979 310 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 RNU4-77P-201ENST00000516692 156 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 AC092447.9-201ENST00000603395 144 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 AC008608.1-201ENST00000603910 127 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 AC084781.2-201ENST00000615568 161 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 U6atac.1-201ENST00000616025 117 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 MIR6740-201ENST00000618268 113 ntBASIC0.2□□□□□ -2.38
RPRD1AQ96P16 AC010332.2-201ENST00000613083 1904 ntBASIC0.19□□□□□ -2.38
RPRD1AQ96P16 RNU6-1115P-201ENST00000362490 106 ntBASIC0.19□□□□□ -2.38
RPRD1AQ96P16 SNORD44.1-201ENST00000363202 61 ntBASIC0.19□□□□□ -2.38
RPRD1AQ96P16 Y_RNA.143-201ENST00000363520 106 ntBASIC0.19□□□□□ -2.38
RPRD1AQ96P16 Y_RNA.241-201ENST00000364470 117 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms