Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC006157.1-201ENST00000611750 366 ntBASIC0.61□□□□□ -2.31
ZNF560Q96MR9 Y_RNA.112-201ENST00000363250 102 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 Y_RNA.286-201ENST00000364813 102 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 MT-TN-201ENST00000387400 73 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 RNU6-847P-201ENST00000411115 108 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 RNU2-13P-201ENST00000515909 113 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 RNU4-57P-201ENST00000515980 135 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF560Q96MR9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ZNF560Q96MR9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF560Q96MR9 PART1_1.1-201ENST00000611761 217 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 AC015726.2-201ENST00000620112 122 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 MTND1P7-201ENST00000632801 297 ntBASIC0.6□□□□□ -2.31
ZNF560Q96MR9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ZNF560Q96MR9 MIR377-201ENST00000362145 69 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 RNU6-899P-201ENST00000363947 107 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 RNU6-580P-201ENST00000365159 107 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 RNU6-144P-201ENST00000383951 107 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 SNORA26.5-201ENST00000391215 123 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 RNA5SP95-201ENST00000410319 137 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 RNU6-191P-201ENST00000516295 94 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 MIR548AO-201ENST00000579992 96 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 MIR4300-201ENST00000581016 96 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 AC012433.1-201ENST00000588916 398 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 AL512605.2-201ENST00000592972 256 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 AC112487.2-201ENST00000637950 304 ntBASIC0.59□□□□□ -2.31
ZNF560Q96MR9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
ZNF560Q96MR9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.58-201ENST00000362807 102 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.136-201ENST00000363444 102 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.154-201ENST00000363624 102 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 RNY3P1-201ENST00000365085 102 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.579-201ENST00000390939 94 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 RNU6-1132P-201ENST00000459214 107 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.702-201ENST00000516843 96 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
ZNF560Q96MR9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
ZNF560Q96MR9 RNY1-201ENST00000364228 113 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 SNORA63.7-201ENST00000365579 123 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 AC023449.1-201ENST00000454464 154 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 MTND3P22-201ENST00000510932 243 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 RNU6-507P-201ENST00000516045 100 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.57□□□□□ -2.32
ZNF560Q96MR9 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 AC022140.2-201ENST00000623500 188 ntBASIC0.57□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.418-201ENST00000384029 102 ntBASIC0.56□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.424-201ENST00000384063 103 ntBASIC0.56□□□□□ -2.32
ZNF560Q96MR9 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
ZNF560Q96MR9 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
ZNF560Q96MR9 AC243994.1-201ENST00000618627 109 ntBASIC0.56□□□□□ -2.32
ZNF560Q96MR9 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
ZNF560Q96MR9 SNORD113-8-201ENST00000363497 74 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.395-201ENST00000383945 109 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 MIR598-201ENST00000384868 97 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 MIR489-201ENST00000384923 84 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 AC107297.1-201ENST00000459991 176 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 RNU6-1170P-201ENST00000515974 106 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 RNU6-764P-201ENST00000516396 105 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 RNU6-1046P-201ENST00000516538 107 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 MIR548S-201ENST00000581352 82 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 AP000753.3-201ENST00000604083 169 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 AC007485.1-201ENST00000616755 206 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 uc_338.22-201ENST00000622722 187 ntBASIC0.55□□□□□ -2.32
ZNF560Q96MR9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.55□□□□□ -2.32
ZNF560Q96MR9 RNU6-1205P-201ENST00000363625 106 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.183-201ENST00000363882 113 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.813-201ENST00000364639 102 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.445-201ENST00000384168 102 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 MT-TD-201ENST00000387419 68 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 RNA5SP436-201ENST00000516020 115 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 C8orf59P2-201ENST00000603441 271 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 AL133255.1-201ENST00000606374 441 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 MIR376A1-201ENST00000616574 68 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 uc_338.4-201ENST00000616635 176 ntBASIC0.54□□□□□ -2.32
ZNF560Q96MR9 RNU6-369P-201ENST00000362515 102 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 RNU4-73P-201ENST00000363164 141 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 SNORA24-201ENST00000384096 131 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 Y_RNA.547-201ENST00000384654 119 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 RNU6-763P-201ENST00000390865 106 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 RNU6-308P-201ENST00000390957 107 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 SNORD115-46-201ENST00000390982 71 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 RNA5SP496-201ENST00000391240 109 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.53□□□□□ -2.32
ZNF560Q96MR9 HSPE1P25-201ENST00000455484 251 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 snoU13.16-201ENST00000459350 104 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
ZNF560Q96MR9 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 MIR4801-201ENST00000582704 82 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 MIR4264-201ENST00000583520 66 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 MIR4795-201ENST00000584182 89 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 Z83818.1-201ENST00000603584 150 ntBASIC0.53□□□□□ -2.32
ZNF560Q96MR9 RNU4-90P-201ENST00000362773 141 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 SNORD45.3-201ENST00000363836 72 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms