Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MIR891A-201ENST00000401237 79 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 RNA5SP425-201ENST00000410336 112 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 RNU6-1061P-201ENST00000516530 99 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 RNU6-919P-201ENST00000516731 104 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 Y_RNA.712-201ENST00000517011 92 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 AC133485.4-201ENST00000561835 220 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 AC138907.4-201ENST00000570107 226 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 ICE2P2-201ENST00000483823 2787 ntBASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM2Q96JY6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNU6-888P-201ENST00000363010 101 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 SNORD24-201ENST00000383884 75 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNU6-1064P-201ENST00000410626 104 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 AC245047.3-201ENST00000429428 127 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 MTATP6P21-201ENST00000440681 189 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 SNRPGP13-201ENST00000442212 177 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNU6-772P-201ENST00000516042 105 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 MIR4419B-201ENST00000577260 68 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM2Q96JY6 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 U8.2-201ENST00000363156 134 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 Y_RNA.280-201ENST00000364765 112 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 MIR29C-201ENST00000385231 88 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 RNA5SP109-201ENST00000391010 116 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 AF228730.3-201ENST00000436691 102 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 AC005786.1-201ENST00000588553 154 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 AL022345.2-201ENST00000606307 135 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 AC022513.1-201ENST00000624512 117 ntBASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDLIM2Q96JY6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 SNORD14E-201ENST00000364009 85 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 RNU1-148P-201ENST00000384472 162 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 MTND5P32-201ENST00000560711 1802 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 MIR4658-201ENST00000584344 65 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 MIR3914-2-201ENST00000637339 95 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
PDLIM2Q96JY6 RNU6-647P-201ENST00000364243 107 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 RNU6-442P-201ENST00000383968 104 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 SNORA70B-201ENST00000384210 135 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 RNU6-476P-201ENST00000384726 107 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 MIR548A2-201ENST00000384956 97 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 SNORD77.3-201ENST00000391113 65 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 RNA5SP482-201ENST00000391269 118 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 MTND5P34-201ENST00000568888 325 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 DEFB122-202ENST00000569013 197 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 MIR4762-201ENST00000585261 75 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 U6.95-201ENST00000636931 70 ntBASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.03□□□□□ -2.08
PDLIM2Q96JY6 U8.5-201ENST00000364528 136 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 RNU6-1144P-201ENST00000384247 104 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 MIR518F-201ENST00000384973 87 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 SNORA40.5-201ENST00000391061 128 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 RN7SKP192-201ENST00000411291 327 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 Y_RNA.630-201ENST00000411370 108 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 SNORD45.4-201ENST00000516629 73 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 RNU7-28P-201ENST00000516759 62 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 AC069114.2-201ENST00000604699 304 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 MIR6129-201ENST00000616087 109 ntBASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.02□□□□□ -2.09
PDLIM2Q96JY6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 RNA5SP363-201ENST00000365072 115 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 RNU6-429P-201ENST00000384582 108 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 MIR597-201ENST00000384968 97 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 MIR548O-201ENST00000408583 114 ntBASIC2.01□□□□□ -2.09
PDLIM2Q96JY6 STAG3L5P-204ENST00000443759 179 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms