Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 RNU2-31P-201ENST00000516954 155 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 AC020661.2-201ENST00000560114 134 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 MIR3171-201ENST00000584270 74 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 AL021707.8-201ENST00000609428 183 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 AC013791.1-201ENST00000616619 62 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 AC015726.2-201ENST00000620112 122 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 RNU6-770P-201ENST00000363929 105 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 Y_RNA.210-201ENST00000364161 110 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 Y_RNA.370-201ENST00000365589 108 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 Y_RNA.527-201ENST00000384573 102 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 MIR215-201ENST00000384858 110 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 RPL21P38-201ENST00000418090 167 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AC098869.1-201ENST00000481627 292 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AC109810.1-201ENST00000534066 224 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AC023827.1-201ENST00000569247 97 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 MIR4680-201ENST00000580906 66 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AL512605.2-201ENST00000592972 256 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.76□□□□□ -2.29
LHX4Q969G2 MIR6734-201ENST00000621166 68 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AC022140.2-201ENST00000623500 188 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 AC068700.1-201ENST00000565862 3754 ntBASIC0.76□□□□□ -2.29
LHX4Q969G2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
LHX4Q969G2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LHX4Q969G2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LHX4Q969G2 SNORA25.1-201ENST00000362326 128 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 Y_RNA.19-201ENST00000362462 99 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 Y_RNA.122-201ENST00000363331 96 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNU6-806P-201ENST00000365147 105 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNU6-326P-201ENST00000365480 107 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 SNORA53-201ENST00000391141 249 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 Y_RNA.604-201ENST00000410574 102 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNU6-383P-201ENST00000410864 94 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.75□□□□□ -2.29
LHX4Q969G2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.75□□□□□ -2.29
LHX4Q969G2 AC091959.1-201ENST00000495857 238 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNU4-57P-201ENST00000515980 135 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNY3P15-201ENST00000516297 97 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 RNU7-181P-201ENST00000517234 74 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.75□□□□□ -2.29
LHX4Q969G2 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
LHX4Q969G2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LHX4Q969G2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
LHX4Q969G2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LHX4Q969G2 Y_RNA.26-201ENST00000362539 101 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 RNU6-797P-201ENST00000363101 109 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 RNU6-514P-201ENST00000384208 107 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 MIR570-201ENST00000384917 97 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 RNA5SP220-201ENST00000516298 104 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 MIR5692C2-201ENST00000577959 77 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 AC037487.3-201ENST00000606668 112 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 MIR6516-201ENST00000630554 81 ntBASIC0.74□□□□□ -2.29
LHX4Q969G2 Y_RNA.217-201ENST00000364214 105 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 SNORA51.10-201ENST00000384418 136 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 Y_RNA.508-201ENST00000384502 114 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 Y_RNA.537-201ENST00000384626 109 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 RNA5SP496-201ENST00000391240 109 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 BTF3P11-201ENST00000426582 477 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
LHX4Q969G2 AC023449.1-201ENST00000454464 154 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 Y_RNA.641-201ENST00000459414 105 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 RNU6-1143P-201ENST00000516125 104 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 AC036111.3-201ENST00000526389 112 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 uc_338.4-201ENST00000616635 176 ntBASIC0.73□□□□□ -2.29
LHX4Q969G2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
LHX4Q969G2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
LHX4Q969G2 MIR367-201ENST00000362299 68 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 Y_RNA.64-201ENST00000362845 102 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 Y_RNA.152-201ENST00000363578 100 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 Y_RNA.153-201ENST00000363615 91 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 RNU6-654P-201ENST00000364373 107 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 SNORA1.2-201ENST00000365189 134 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 RNU6-662P-201ENST00000384253 104 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 RNU2-13P-201ENST00000515909 113 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 RNU7-25P-201ENST00000516544 62 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 RNU7-149P-201ENST00000516739 59 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 AP003733.2-201ENST00000529409 171 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 MIR4724-201ENST00000579485 89 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 SNORA4-201ENST00000584302 138 ntBASIC0.72□□□□□ -2.29
LHX4Q969G2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
LHX4Q969G2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.72□□□□□ -2.29
LHX4Q969G2 Y_RNA.14-201ENST00000362415 103 ntBASIC0.71□□□□□ -2.3
LHX4Q969G2 RNU6-1138P-201ENST00000365359 106 ntBASIC0.71□□□□□ -2.3
LHX4Q969G2 RNU6-42P-201ENST00000384165 107 ntBASIC0.71□□□□□ -2.3
LHX4Q969G2 RNU6-613P-201ENST00000410412 108 ntBASIC0.71□□□□□ -2.3
LHX4Q969G2 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
LHX4Q969G2 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms