Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-381P-201ENST00000391259 108 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 SNRPGP14-201ENST00000435400 219 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 AC093850.1-201ENST00000454121 251 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 RN7SKP164-201ENST00000516138 266 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 SNORD77.4-201ENST00000516158 81 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-126P-201ENST00000516685 103 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 MIR4662B-201ENST00000579498 81 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 AC009779.6-201ENST00000603972 165 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 MIR616-201ENST00000385293 97 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.626-201ENST00000411288 95 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AC245047.8-201ENST00000456455 284 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AC092991.1-201ENST00000477176 376 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AC090049.2-201ENST00000550377 109 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AL160236.1-201ENST00000556317 195 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AL365434.2-201ENST00000607979 234 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 AC141273.2-201ENST00000618989 130 ntBASIC1.39□□□□□ -2.19
SLC44A1Q8WWI5 MIR337-201ENST00000362281 93 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-379P-201ENST00000363813 104 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 snoU2_19.4-201ENST00000364329 80 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.476-201ENST00000384347 108 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.572-201ENST00000384757 98 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 MIR526A1-201ENST00000384897 85 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 SNORD72-201ENST00000390994 80 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 SNX2P2-201ENST00000424553 323 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 AL049861.1-201ENST00000603130 150 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 AC006441.5-201ENST00000612680 209 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
SLC44A1Q8WWI5 MIR15B-201ENST00000385045 98 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-1228P-201ENST00000391014 107 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 RNU2-55P-201ENST00000411146 174 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-322P-201ENST00000516010 103 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 RNU7-149P-201ENST00000516739 59 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 AC106754.2-201ENST00000623006 233 ntBASIC1.37□□□□□ -2.19
SLC44A1Q8WWI5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-103P-201ENST00000363686 107 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.200-201ENST00000364018 102 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 MIR802-201ENST00000390235 94 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 RPL30P7-201ENST00000479312 323 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 MIR3937-201ENST00000580135 106 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.199-201ENST00000364014 102 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-268P-201ENST00000364174 107 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.552-201ENST00000384665 112 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 SNORD41-201ENST00000386967 70 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 AL451046.2-201ENST00000403074 277 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 SCARNA8-201ENST00000515924 131 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-830P-201ENST00000516353 107 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 MIR4781-201ENST00000585250 76 ntBASIC1.35□□□□□ -2.19
SLC44A1Q8WWI5 MIR411-201ENST00000362239 96 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.121-201ENST00000363309 113 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.435-201ENST00000384095 112 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 SNORD38C-201ENST00000384381 69 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.515-201ENST00000384535 112 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 MIR136-201ENST00000385207 82 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 Y_RNA.587-201ENST00000391210 103 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 AC097639.2-201ENST00000603159 172 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 Z83818.1-201ENST00000603584 150 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 AL357312.1-201ENST00000603879 298 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 Pinc.1-201ENST00000616452 154 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
SLC44A1Q8WWI5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.83-201ENST00000363005 113 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 Y_RNA.308-201ENST00000365043 101 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-484P-201ENST00000384016 107 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 AL606845.1-201ENST00000404881 255 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 RNU6-453P-201ENST00000516819 85 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
SLC44A1Q8WWI5 AC130289.1-201ENST00000577321 73 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms