Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-917P-201ENST00000516294 104 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 RNU7-149P-201ENST00000516739 59 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 AC019176.1-201ENST00000518519 225 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 AC012493.3-201ENST00000604494 112 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.199-201ENST00000364014 102 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.200-201ENST00000364018 102 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.242-201ENST00000364473 110 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RNU6-1138P-201ENST00000365359 106 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 SNORA2.2-201ENST00000365473 135 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RNU6-442P-201ENST00000383968 104 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 MT-TT-201ENST00000387460 66 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.587-201ENST00000391210 103 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RN7SKP164-201ENST00000516138 266 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RNU6-453P-201ENST00000516819 85 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RNU6-388P-201ENST00000517012 105 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 RNU6-389P-201ENST00000517048 105 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 AL391903.3-201ENST00000612158 163 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 AC078938.1-201ENST00000620993 318 ntBASIC1.62□□□□□ -2.15
HMGB4Q8WW32 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB4Q8WW32 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HMGB4Q8WW32 RNU6-60P-201ENST00000364792 103 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 RNY3P5-201ENST00000384127 102 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 AC015922.2-201ENST00000435593 184 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 RNA5SP445-201ENST00000515889 115 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 AC090142.3-201ENST00000519012 385 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB4Q8WW32 AC090049.2-201ENST00000550377 109 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
HMGB4Q8WW32 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB4Q8WW32 MIR411-201ENST00000362239 96 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 SNORA25.9-201ENST00000365087 128 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.552-201ENST00000384665 112 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 MIR802-201ENST00000390235 94 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 RNU6-493P-201ENST00000391321 108 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGB4Q8WW32 SNX2P2-201ENST00000424553 323 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 AC130289.1-201ENST00000577321 73 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 MIR4662B-201ENST00000579498 81 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 MIR3937-201ENST00000580135 106 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 MIR4308-201ENST00000580634 81 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 AC006441.5-201ENST00000612680 209 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 Pinc.1-201ENST00000616452 154 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.6□□□□□ -2.15
HMGB4Q8WW32 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.83-201ENST00000363005 113 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 RNU6-268P-201ENST00000364174 107 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 RNU6-923P-201ENST00000364753 107 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 MIR499A-201ENST00000384903 122 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 RNU6-1228P-201ENST00000391014 107 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 AL606845.1-201ENST00000404881 255 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 RPS27P16-201ENST00000425758 201 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGB4Q8WW32 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 FAM106DP-201ENST00000586416 501 ntBASIC1.59□□□□□ -2.15
HMGB4Q8WW32 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMGB4Q8WW32 RNU6-103P-201ENST00000363686 107 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.515-201ENST00000384535 112 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 MIR516B2-201ENST00000385190 85 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 RNU2-55P-201ENST00000411146 174 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 RNU6-902P-201ENST00000517212 91 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 MIR7111-201ENST00000619751 72 ntBASIC1.58□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.7-201ENST00000362352 102 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.486-201ENST00000384398 107 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 MIR136-201ENST00000385207 82 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 SNORD41-201ENST00000386967 70 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 AL451046.2-201ENST00000403074 277 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGB4Q8WW32 RNU6-322P-201ENST00000516010 103 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 RNU6-922P-201ENST00000516753 99 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 Z83818.1-201ENST00000603584 150 ntBASIC1.57□□□□□ -2.16
HMGB4Q8WW32 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.121-201ENST00000363309 113 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.274-201ENST00000364714 101 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 RNU6-484P-201ENST00000384016 107 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 SNORD38C-201ENST00000384381 69 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 SNRPGP8-201ENST00000454064 226 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 RNU6-126P-201ENST00000516685 103 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 RNU2-4P-201ENST00000606190 192 ntBASIC1.56□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.257-201ENST00000364596 102 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.571-201ENST00000384753 98 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 RNU6-918P-201ENST00000391219 106 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 Y_RNA.622-201ENST00000411091 108 ntBASIC1.55□□□□□ -2.16
HMGB4Q8WW32 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGB4Q8WW32 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms