Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RPL23AP91-201ENST00000569211 455 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 MIR2681-201ENST00000581814 105 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 MIR5690-201ENST00000583739 73 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 AC020891.4-201ENST00000605745 93 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 AC022306.2-201ENST00000617563 647 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 U2.1-201ENST00000618978 145 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 RNY3P11-201ENST00000364153 102 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.412-201ENST00000384001 104 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.433-201ENST00000384089 102 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 MIR518A1-201ENST00000385068 85 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 SNORD72-201ENST00000390994 80 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 PDCL2P1-201ENST00000419302 352 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 SNORD11-201ENST00000459124 84 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 snoU13.16-201ENST00000459350 104 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 RPL23AP54-201ENST00000495129 419 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 MIR4676-201ENST00000583078 72 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 AP000753.3-201ENST00000604083 169 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 RAC1P9-201ENST00000604990 392 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 AL162730.1-201ENST00000605734 292 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 JPX_2.1-201ENST00000614161 69 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 MIR548AY-201ENST00000617669 107 ntBASIC0.12□□□□□ -2.39
LMX1AQ8TE12 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.242-201ENST00000364473 110 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 RNA5SP517-201ENST00000364724 117 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 MIR559-201ENST00000385188 96 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 RNU6-205P-201ENST00000390858 107 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.635-201ENST00000459041 101 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 RNU7-169P-201ENST00000459456 61 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 AC091959.1-201ENST00000495857 238 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 SCARNA8-201ENST00000515924 131 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 RNA5SP285-201ENST00000516619 119 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 AC006600.1-201ENST00000572529 153 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 MIR4771-2-201ENST00000577758 74 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 AC090897.1-201ENST00000580909 226 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 MIR4771-1-201ENST00000582617 74 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.11□□□□□ -2.39
LMX1AQ8TE12 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 AC092634.7-201ENST00000621022 103 ntBASIC0.11□□□□□ -2.39
LMX1AQ8TE12 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.178-201ENST00000363832 102 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.474-201ENST00000384341 102 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.605-201ENST00000410577 105 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 RNU6-370P-201ENST00000411008 104 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 SNORA40.8-201ENST00000411034 126 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 SNRPGP12-201ENST00000449481 213 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.1□□□□□ -2.39
LMX1AQ8TE12 RNU6-437P-201ENST00000459408 95 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 MTND4P17-201ENST00000470444 350 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 DEFB117-201ENST00000602356 141 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 AC008608.1-201ENST00000603910 127 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 MIR8055-201ENST00000610739 97 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 AC073869.6-201ENST00000640656 341 ntBASIC0.1□□□□□ -2.39
LMX1AQ8TE12 RNU6-490P-201ENST00000362985 107 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 RNU6-801P-201ENST00000364087 105 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 SNORD63-201ENST00000384262 68 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 MIR1278-201ENST00000408753 81 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 SNORA36B-201ENST00000410438 131 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 MTND1P34-201ENST00000438556 671 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 AC099799.1-201ENST00000439809 192 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.09□□□□□ -2.4
LMX1AQ8TE12 MIR18B-201ENST00000454574 71 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 RNU6-1007P-201ENST00000516586 107 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.09□□□□□ -2.4
LMX1AQ8TE12 AC022523.2-201ENST00000561045 150 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 VN1R91P-201ENST00000594377 169 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 SNORA25.18-201ENST00000607153 114 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 AC084782.3-201ENST00000612282 578 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
LMX1AQ8TE12 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.08□□□□□ -2.4
LMX1AQ8TE12 SNORA63C-201ENST00000364578 129 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.331-201ENST00000365267 102 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.494-201ENST00000384432 111 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.547-201ENST00000384654 119 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 MIR938-201ENST00000401216 83 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AC024067.1-201ENST00000426199 223 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 TRBVB-201ENST00000477100 408 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 RNA5SP94-201ENST00000516917 108 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.08□□□□□ -2.4
LMX1AQ8TE12 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AL355297.3-201ENST00000604082 446 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AL080274.1-201ENST00000605565 220 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AC025253.1-201ENST00000613623 543 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 AC022140.2-201ENST00000623500 188 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 Z97988.1-201ENST00000637697 135 ntBASIC0.08□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.314-201ENST00000365114 102 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 SNORD81.2-201ENST00000365153 76 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 SNORA72.4-201ENST00000384174 132 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 Y_RNA.458-201ENST00000384240 102 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 MIR125B2-201ENST00000385128 89 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 RNU6-679P-201ENST00000391003 106 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 RNU2-14P-201ENST00000411053 191 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 RNU7-73P-201ENST00000458743 63 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 RNU7-62P-201ENST00000458856 62 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 RNU7-141P-201ENST00000459304 62 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 AC010655.3-201ENST00000478818 450 ntBASIC0.07□□□□□ -2.4
LMX1AQ8TE12 SNORA25.12-201ENST00000516202 82 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms