Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SNORD14A-201ENST00000606526 91 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-23P-201ENST00000363283 107 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 SNORD18B-201ENST00000365659 72 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-1056P-201ENST00000383996 107 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 SNORA40.5-201ENST00000391061 128 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 AL606517.2-201ENST00000442855 241 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 RNU7-94P-201ENST00000459576 63 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 MIR3914-2-201ENST00000637339 95 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
SHCBP1Q8NEM2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-888P-201ENST00000363010 101 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 SNORD115-3-201ENST00000363100 82 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 SNORD24-201ENST00000383884 75 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-429P-201ENST00000384582 108 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 MIR548A2-201ENST00000384956 97 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-1064P-201ENST00000410626 104 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 FTH1P12-201ENST00000432137 551 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 AC087685.1-201ENST00000587507 141 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 AP000942.3-201ENST00000603702 160 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 AC022217.4-201ENST00000604389 163 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 AL391516.1-201ENST00000554380 2449 ntBASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SHCBP1Q8NEM2 AC245060.5-201ENST00000610778 3293 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 RNU1-17P-201ENST00000363022 152 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 Y_RNA.630-201ENST00000411370 108 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 RNU5E-3P-201ENST00000515913 68 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 AC026271.5-201ENST00000577873 130 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 MIR6129-201ENST00000616087 109 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
SHCBP1Q8NEM2 SNORD68-201ENST00000363214 84 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 SNORA3A-201ENST00000364113 130 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-1144P-201ENST00000384247 104 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-476P-201ENST00000384726 107 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 Y_RNA.651-201ENST00000459380 103 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-693P-201ENST00000516134 107 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-1061P-201ENST00000516530 99 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 MIR3126-201ENST00000577443 74 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 MTND5P32-201ENST00000560711 1802 ntBASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHCBP1Q8NEM2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 MIR518F-201ENST00000384973 87 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 Y_RNA.617-201ENST00000410920 90 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 SNRPGP13-201ENST00000442212 177 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 RNA5SP236-201ENST00000516169 116 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 AC133485.4-201ENST00000561835 220 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 AC138907.4-201ENST00000570107 226 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 MIR4762-201ENST00000585261 75 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 AL022345.2-201ENST00000606307 135 ntBASIC2.29□□□□□ -2.04
SHCBP1Q8NEM2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 RNU1-58P-201ENST00000362413 163 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 U8.5-201ENST00000364528 136 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 SNORD58C-201ENST00000365223 64 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 RNA5SP109-201ENST00000391010 116 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 SNORD77.3-201ENST00000391113 65 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 BX510359.4-201ENST00000423750 193 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 AC245047.3-201ENST00000429428 127 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 AF228730.3-201ENST00000436691 102 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 SNORD33.1-201ENST00000516213 88 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 RNU6-781P-201ENST00000516377 101 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 MTND5P34-201ENST00000568888 325 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 MIR376A2-201ENST00000636782 80 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 U6.95-201ENST00000636931 70 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.28□□□□□ -2.04
SHCBP1Q8NEM2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 Y_RNA.164-201ENST00000363709 102 ntBASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 RNU6-647P-201ENST00000364243 107 ntBASIC2.27□□□□□ -2.05
SHCBP1Q8NEM2 Y_RNA.242-201ENST00000364473 110 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms