Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC016717.2-201ENST00000609089 5141 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-647P-201ENST00000364243 107 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-755P-201ENST00000364400 103 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 SNORA12.1-201ENST00000390873 148 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 AL603825.1-201ENST00000438481 80 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP57-201ENST00000459463 123 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 MIR3129-201ENST00000581095 76 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 AL359075.3-201ENST00000613288 217 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 MTND5P32-201ENST00000560711 1802 ntBASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SIMC1Q8NDZ2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 SNORD61-201ENST00000384252 73 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 SNORD72-201ENST00000390994 80 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RN7SKP223-201ENST00000410582 62 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP501-201ENST00000410990 112 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP247-201ENST00000411181 105 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AC069257.2-201ENST00000441819 155 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 Y_RNA.651-201ENST00000459380 103 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-781P-201ENST00000516377 101 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-341P-201ENST00000516973 96 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AC008507.4-201ENST00000585464 127 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AC069114.2-201ENST00000604699 304 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AL670379.3-201ENST00000605040 251 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AL022345.2-201ENST00000606307 135 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP276-201ENST00000362580 94 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 SNORA33-201ENST00000363664 130 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 RNU11-5P-201ENST00000391216 129 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 AC244636.1-201ENST00000421152 228 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 AC063976.4-201ENST00000421971 163 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 RN7SKP19-201ENST00000516016 252 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP458-201ENST00000516188 119 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 AL773524.1-201ENST00000614065 229 ntBASIC2.16□□□□□ -2.06
SIMC1Q8NDZ2 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 MIRLET7F2-201ENST00000385277 83 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 MIR548A3-201ENST00000385297 97 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 CST2P1-201ENST00000425770 87 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 AF228730.3-201ENST00000436691 102 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 RNA5SP236-201ENST00000516169 116 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 Y_RNA.666-201ENST00000516187 112 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 RNU1-142P-201ENST00000516682 145 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-1270P-201ENST00000517128 108 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 MIR1273D-201ENST00000577266 86 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SIMC1Q8NDZ2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-1298P-201ENST00000362456 101 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-888P-201ENST00000363010 101 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 SNORD24-201ENST00000383884 75 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 SNORD116-21-201ENST00000384507 92 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 AL117342.1-201ENST00000404861 406 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 MTATP6P21-201ENST00000440681 189 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 IGKV1-22-201ENST00000524313 326 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 AL358944.1-201ENST00000528537 144 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 MIR3613-201ENST00000579844 87 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 AL591926.4-201ENST00000616895 298 ntBASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
SIMC1Q8NDZ2 MIR126-201ENST00000362291 85 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 Y_RNA.35-201ENST00000362601 101 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-147P-201ENST00000383983 107 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 MIR548A2-201ENST00000384956 97 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 MIR764-201ENST00000390811 85 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 RNU6-693P-201ENST00000516134 107 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 AC025166.1-201ENST00000612411 163 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 AL353997.5-201ENST00000618886 171 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 AL121890.5-201ENST00000620848 304 ntBASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.13□□□□□ -2.07
SIMC1Q8NDZ2 SNORA1B-201ENST00000362535 133 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 Y_RNA.346-201ENST00000365385 112 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 MIR548A1-201ENST00000385041 97 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 RNA5SP323-201ENST00000391094 133 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 SNORD77.3-201ENST00000391113 65 ntBASIC2.12□□□□□ -2.07
SIMC1Q8NDZ2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms