Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 U8.5-201ENST00000364528 136 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-1325P-201ENST00000364905 105 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 SNORA6-201ENST00000384033 151 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 AL035461.1-201ENST00000421490 332 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 FTH1P12-201ENST00000432137 551 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 RNA5SP236-201ENST00000516169 116 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.692-201ENST00000516627 105 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.757-201ENST00000578934 114 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 MIR4781-201ENST00000585250 76 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 AC022202.1-201ENST00000613515 211 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.114-201ENST00000363265 113 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-44P-201ENST00000384045 107 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-429P-201ENST00000384582 108 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.617-201ENST00000410920 90 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 AC108667.1-201ENST00000428618 249 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.651-201ENST00000459380 103 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-504P-201ENST00000516568 104 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SLC44A3Q8N4M1 MIR126-201ENST00000362291 85 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-23P-201ENST00000363283 107 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-309P-201ENST00000364573 106 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-1292P-201ENST00000383856 107 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 MIR518F-201ENST00000384973 87 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 RNA5SP323-201ENST00000391094 133 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 SNRPGP14-201ENST00000435400 219 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.666-201ENST00000516187 112 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.690-201ENST00000516603 95 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 MIR3129-201ENST00000581095 76 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SLC44A3Q8N4M1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-1056P-201ENST00000383996 107 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 MIRLET7F2-201ENST00000385277 83 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.630-201ENST00000411370 108 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 AL049830.1-201ENST00000468034 425 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 SNORA18.4-201ENST00000516440 124 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-1270P-201ENST00000517128 108 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 AC245884.12-201ENST00000615364 59 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 MIR376A2-201ENST00000636782 80 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 AL442644.1-201ENST00000454390 3105 ntBASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SLC44A3Q8N4M1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 SNORD58C-201ENST00000365223 64 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-1144P-201ENST00000384247 104 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-476P-201ENST00000384726 107 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 SNORD77.3-201ENST00000391113 65 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-1064P-201ENST00000410626 104 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 SNRPGP13-201ENST00000442212 177 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 SCARNA15-202ENST00000516881 127 ntBASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.1□□□□□ -2.07
SLC44A3Q8N4M1 MIR337-201ENST00000362281 93 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 RNU1-58P-201ENST00000362413 163 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 SNORD33.1-201ENST00000516213 88 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 AC026271.5-201ENST00000577873 130 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 AC005786.1-201ENST00000588553 154 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 AC006441.5-201ENST00000612680 209 ntBASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SLC44A3Q8N4M1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.08
SLC44A3Q8N4M1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 MTND5P32-201ENST00000560711 1802 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-153P-201ENST00000364422 104 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 MIR29C-201ENST00000385231 88 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 RNY4P18-201ENST00000391107 89 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 AF228730.3-201ENST00000436691 102 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-781P-201ENST00000516377 101 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 RNA5SP137-201ENST00000516833 135 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 IGKV1-22-201ENST00000524313 326 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 AL022345.2-201ENST00000606307 135 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 MIR6129-201ENST00000616087 109 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 U6.95-201ENST00000636931 70 ntBASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SLC44A3Q8N4M1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 RNU6-647P-201ENST00000364243 107 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.07□□□□□ -2.08
SLC44A3Q8N4M1 RNA5SP109-201ENST00000391010 116 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms