Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNORD14E-201ENST00000364009 85 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.242-201ENST00000364473 110 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 RNU4-11P-201ENST00000365287 132 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 RNU6-163P-201ENST00000384396 106 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 AL392103.1-201ENST00000447000 198 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 RNU6-504P-201ENST00000516568 104 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 RNA5SP481-201ENST00000516814 122 ntBASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLIP4Q8N3C7 MIRLET7C-201ENST00000362160 84 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 RNU6-199P-201ENST00000362954 107 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 RNU6-978P-201ENST00000364371 103 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.488-201ENST00000384403 102 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 SNORA40.18-201ENST00000391200 128 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 U8.16-201ENST00000391279 133 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 RNU6-588P-201ENST00000410281 105 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 CALM2P4-201ENST00000430810 426 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 RNU7-34P-201ENST00000459394 64 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 AC114811.1-201ENST00000507207 168 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 RNA5SP182-201ENST00000516064 82 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 RNA5SP168-201ENST00000516642 112 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 MIR4709-201ENST00000577272 72 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 MIR3646-201ENST00000578301 84 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 MIR4713-201ENST00000582691 75 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 AC097639.2-201ENST00000603159 172 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 AC120024.3-201ENST00000603167 156 ntBASIC1.62□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.66-201ENST00000362862 102 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 SNORA25.7-201ENST00000364375 127 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 RNU6-442P-201ENST00000383968 104 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 MIR613-201ENST00000385248 95 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 MIR513C-201ENST00000401352 84 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 AC112693.2-201ENST00000556538 232 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 MIR548X2-201ENST00000579776 100 ntBASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CLIP4Q8N3C7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 SNORD114-1-201ENST00000362705 72 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.343-201ENST00000365354 112 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU6-597P-201ENST00000365620 102 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU6-1336P-201ENST00000383886 109 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 SNORD61-201ENST00000384252 73 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU6-424P-201ENST00000384367 105 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RPL30P13-201ENST00000418873 348 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 UBL5P3-201ENST00000475112 231 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 CYCTP-201ENST00000504253 315 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU7-12P-201ENST00000516030 62 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 RNU6-693P-201ENST00000516134 107 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 AC103810.8-201ENST00000607347 118 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 AC021506.2-201ENST00000612354 169 ntBASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CLIP4Q8N3C7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 RNU6-268P-201ENST00000364174 107 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.497-201ENST00000384447 98 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 RNU6-360P-201ENST00000390944 104 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 SNORA75.5-201ENST00000391291 81 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 RPL23AP42-201ENST00000471152 471 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 RNA5SP272-201ENST00000516095 111 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 SNORA25.12-201ENST00000516202 82 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 AC006441.5-201ENST00000612680 209 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 AC027279.3-201ENST00000625055 122 ntBASIC1.59□□□□□ -2.15
CLIP4Q8N3C7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 RNU6-704P-201ENST00000364162 103 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 MIR504-201ENST00000385065 83 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 MIR569-201ENST00000385228 96 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 MIR891A-201ENST00000401237 79 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 SNRPGP14-201ENST00000435400 219 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 HMGN2P32-201ENST00000444648 269 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 RNU6-426P-201ENST00000516464 97 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 AC007751.1-201ENST00000529260 376 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 MIR3910-1-201ENST00000580936 111 ntBASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CLIP4Q8N3C7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 RNU6-888P-201ENST00000363010 101 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 RNU6-833P-201ENST00000363486 107 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 SNORD50.2-201ENST00000365465 70 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms