Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 U8.20-201ENST00000459445 131 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 RPS29P30-201ENST00000600975 111 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 AC015726.2-201ENST00000620112 122 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
CCDC65Q8IXS2 Y_RNA.418-201ENST00000384029 102 ntBASIC0.42□□□□□ -2.34
CCDC65Q8IXS2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.42□□□□□ -2.34
CCDC65Q8IXS2 RNU6-875P-201ENST00000516488 106 ntBASIC0.42□□□□□ -2.34
CCDC65Q8IXS2 AC022140.2-201ENST00000623500 188 ntBASIC0.42□□□□□ -2.34
CCDC65Q8IXS2 SNORA24-201ENST00000384096 131 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 Y_RNA.529-201ENST00000384586 119 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 MIR573-201ENST00000384964 99 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 RNU6-847P-201ENST00000411115 108 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 RNU6-191P-201ENST00000516295 94 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 LARP7P1-201ENST00000605576 316 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 AL138825.1-201ENST00000618587 192 ntBASIC0.41□□□□□ -2.34
CCDC65Q8IXS2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.471-201ENST00000384312 102 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.547-201ENST00000384654 119 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 RNU6-21P-201ENST00000384710 107 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 MIR802-201ENST00000390235 94 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 RNU6-205P-201ENST00000390858 107 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 RNU6-976P-201ENST00000516086 111 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 RNU6-496P-201ENST00000516145 99 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 RNU7-25P-201ENST00000516544 62 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 SNORD113-5-201ENST00000607261 78 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 AL021707.8-201ENST00000609428 183 ntBASIC0.4□□□□□ -2.35
CCDC65Q8IXS2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 SNORA1.2-201ENST00000365189 134 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 RNY3-201ENST00000365484 102 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 RNU6-308P-201ENST00000390957 107 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 SNORD83.1-201ENST00000411362 77 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 POLR2KP2-201ENST00000438155 177 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 AC091959.1-201ENST00000495857 238 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 SEPT14P8-201ENST00000508026 178 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 RNU6-764P-201ENST00000516396 105 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 RNU6-1046P-201ENST00000516538 107 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 AC020891.4-201ENST00000605745 93 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
CCDC65Q8IXS2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.58-201ENST00000362807 102 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.116-201ENST00000363292 103 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.154-201ENST00000363624 102 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 RNY3P1-201ENST00000365085 102 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 RNU6-934P-201ENST00000365154 107 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 RNU6-102P-201ENST00000384485 104 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 RNU6-763P-201ENST00000390865 106 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 BTF3P11-201ENST00000426582 477 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 HSPE1P25-201ENST00000455484 251 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.713-201ENST00000517013 96 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 AC007751.1-201ENST00000529260 376 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 AC040926.1-201ENST00000530195 238 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 MIR4264-201ENST00000583520 66 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 SNORA4-201ENST00000584302 138 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 uc_338.4-201ENST00000616635 176 ntBASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
CCDC65Q8IXS2 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.136-201ENST00000363444 102 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.263-201ENST00000364659 114 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 RNU6-42P-201ENST00000384165 107 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 MIR520H-201ENST00000385126 88 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.637-201ENST00000459424 114 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 RNU6-1170P-201ENST00000515974 106 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.715-201ENST00000517082 110 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 MIR4804-201ENST00000581683 73 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 AC007485.1-201ENST00000616755 206 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 AC112487.2-201ENST00000637950 304 ntBASIC0.37□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.197-201ENST00000364004 102 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU6-1248P-201ENST00000391096 64 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 MIR1302-11-201ENST00000408051 138 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 MIR1302-9-201ENST00000408365 138 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 MIR1302-10-201ENST00000408734 138 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU6-383P-201ENST00000410864 94 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU7-56P-201ENST00000458744 62 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 SCARNA8-201ENST00000515924 131 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU6-507P-201ENST00000516045 100 ntBASIC0.36□□□□□ -2.35
CCDC65Q8IXS2 RNU6-475P-201ENST00000516073 104 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms