Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SNORA18.7-201ENST00000516910 131 ntBASIC1.11□□□□□ -2.23
NUP54Q7Z3B4 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
NUP54Q7Z3B4 MIR3192-201ENST00000584920 77 ntBASIC1.11□□□□□ -2.23
NUP54Q7Z3B4 U2.14-201ENST00000615943 113 ntBASIC1.11□□□□□ -2.23
NUP54Q7Z3B4 uc_338.4-201ENST00000616635 176 ntBASIC1.11□□□□□ -2.23
NUP54Q7Z3B4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
NUP54Q7Z3B4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 Y_RNA.461-201ENST00000384263 103 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 MT-TW-201ENST00000387382 68 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 MIR4764-201ENST00000580680 88 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 AL391903.3-201ENST00000612158 163 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 Y_RNA.802-201ENST00000614892 130 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 Pinc.1-201ENST00000616452 154 ntBASIC1.1□□□□□ -2.23
NUP54Q7Z3B4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 Y_RNA.459-201ENST00000384251 102 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 AC245047.8-201ENST00000456455 284 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 TRMT112P2-201ENST00000512910 132 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 AC090821.2-201ENST00000523552 176 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 AL360085.1-201ENST00000604713 532 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.09□□□□□ -2.23
NUP54Q7Z3B4 Y_RNA.82-201ENST00000363000 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.92-201ENST00000363043 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.149-201ENST00000363558 117 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.235-201ENST00000364412 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 RNU6-740P-201ENST00000364734 105 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.306-201ENST00000365015 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.312-201ENST00000365089 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.322-201ENST00000365151 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 RNU6-472P-201ENST00000384299 107 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.483-201ENST00000384380 101 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 AL358176.2-201ENST00000425769 204 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 snoU13.25-201ENST00000458945 104 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.650-201ENST00000459002 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 AC005840.1-201ENST00000498412 377 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 MTCO2P24-201ENST00000515611 426 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.777-201ENST00000516982 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.771-201ENST00000598668 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 AC006006.1-201ENST00000603082 144 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.789-201ENST00000622480 102 ntBASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.08□□□□□ -2.24
NUP54Q7Z3B4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.47-201ENST00000362697 108 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.117-201ENST00000363294 101 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 RNU6-392P-201ENST00000364926 101 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 SNORA8.3-201ENST00000384679 139 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 SNORD2.1-201ENST00000458762 69 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 RN7SKP164-201ENST00000516138 266 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 SNORD77.4-201ENST00000516158 81 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 RNU7-149P-201ENST00000516739 59 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 MIR4662B-201ENST00000579498 81 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 AL049861.1-201ENST00000603130 150 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NUP54Q7Z3B4 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
NUP54Q7Z3B4 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
NUP54Q7Z3B4 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
NUP54Q7Z3B4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP54Q7Z3B4 RNU6-327P-201ENST00000516270 127 ntBASIC1.06□□□□□ -2.24
NUP54Q7Z3B4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP54Q7Z3B4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 RNY1P10-201ENST00000363268 113 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 RNU4-10P-201ENST00000364383 140 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 MIR626-201ENST00000385032 94 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 RNU6-126P-201ENST00000516685 103 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 AC100767.1-201ENST00000528178 123 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 AP003716.2-201ENST00000528260 108 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 MIR548AR-201ENST00000582191 57 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 MIR4282-201ENST00000583613 67 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 AC015726.2-201ENST00000620112 122 ntBASIC1.05□□□□□ -2.24
NUP54Q7Z3B4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 RNU6-1309P-201ENST00000363305 108 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 SNORA1.2-201ENST00000365189 134 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.352-201ENST00000365439 102 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.396-201ENST00000383949 103 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.04□□□□□ -2.24
NUP54Q7Z3B4 MTND2P23-201ENST00000422990 651 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms