Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 AC005042.3-201ENST00000453230 174 ntBASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 RNU7-67P-201ENST00000459003 62 ntBASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 AC091951.2-201ENST00000500762 203 ntBASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 RNU7-156P-201ENST00000517214 74 ntBASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
SSX9Q7RTT3 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 RNA5SP214-201ENST00000363378 118 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 MIR518F-201ENST00000384973 87 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 MIR18B-201ENST00000454574 71 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 AC107297.1-201ENST00000459991 176 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 RNU7-4P-201ENST00000516961 62 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 DEFB117-201ENST00000602356 141 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 AL355297.3-201ENST00000604082 446 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 AC048344.4-201ENST00000619744 527 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 SNORD38B-201ENST00000384690 67 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 MIR1257-201ENST00000408490 117 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 MIR1197-201ENST00000408818 88 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 SEPT7P4-201ENST00000437076 306 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 RNU7-185P-201ENST00000459215 60 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 RNU6-437P-201ENST00000459408 95 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 AL080274.1-201ENST00000605565 220 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 SNORD38B-202ENST00000625943 69 ntBASIC-0.07□□□□□ -2.42
SSX9Q7RTT3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 RNU4-24P-201ENST00000364565 139 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 MIR628-201ENST00000385229 95 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 AC024067.1-201ENST00000426199 223 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 RNA5SP330-201ENST00000517096 96 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 AC133485.4-201ENST00000561835 220 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 U4.5-201ENST00000617137 123 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 TPTEP1-208ENST00000636884 213 ntBASIC-0.08□□□□□ -2.42
SSX9Q7RTT3 SNORA42.1-201ENST00000363515 137 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 SNORA24-201ENST00000384096 131 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 RNU6-708P-201ENST00000384217 107 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 RNU7-25P-201ENST00000516544 62 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 RNU6-958P-201ENST00000516995 106 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 SNORD92-201ENST00000585078 85 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 U6.92-201ENST00000636464 89 ntBASIC-0.09□□□□□ -2.42
SSX9Q7RTT3 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 MIR588-201ENST00000384900 83 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 SNORA36B-201ENST00000410438 131 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 RNU2-59P-201ENST00000410482 191 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 RNU6-448P-201ENST00000517052 107 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 AC104408.1-201ENST00000605241 170 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 U2.1-201ENST00000618978 145 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 AC098679.4-201ENST00000624241 654 ntBASIC-0.1□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 RNU4-14P-201ENST00000410858 122 ntBASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 RNA5SP127-201ENST00000411051 133 ntBASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 SNORD11-201ENST00000459124 84 ntBASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 AC022306.2-201ENST00000617563 647 ntBASIC-0.11□□□□□ -2.43
SSX9Q7RTT3 SNORA36.1-201ENST00000363424 132 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 MIR548O-201ENST00000408583 114 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 MIR3145-201ENST00000580727 82 ntBASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.12□□□□□ -2.43
SSX9Q7RTT3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 RNU6-674P-201ENST00000363831 107 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 RNU7-30P-201ENST00000516835 62 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 MIR6779-201ENST00000617283 64 ntBASIC-0.13□□□□□ -2.43
SSX9Q7RTT3 SNORD115-34-201ENST00000362441 82 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-12-201ENST00000362583 82 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-29-201ENST00000362834 82 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-9-201ENST00000362912 82 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-21-201ENST00000362963 81 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD81.1-201ENST00000363064 77 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-14-201ENST00000363090 81 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-13-201ENST00000363358 82 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-41-201ENST00000363608 82 ntBASIC-0.14□□□□□ -2.43
SSX9Q7RTT3 SNORD115-11-201ENST00000363616 82 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms