Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC006157.1-201ENST00000611750 366 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.116-201ENST00000363292 103 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 RNU6-899P-201ENST00000363947 107 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.286-201ENST00000364813 102 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.356-201ENST00000365475 113 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 RNU6-205P-201ENST00000390858 107 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 SNORA26.5-201ENST00000391215 123 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 RNU6-977P-201ENST00000516411 103 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.45□□□□□ -2.34
NIPAL3Q6P499 uc_338.4-201ENST00000616635 176 ntBASIC0.45□□□□□ -2.34
NIPAL3Q6P499 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
NIPAL3Q6P499 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 RNU6-42P-201ENST00000384165 107 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 RNY1P14-201ENST00000384426 108 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.529-201ENST00000384586 119 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 MIR520F-201ENST00000384824 87 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 RNU6-1009P-201ENST00000390996 107 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 RNU6-875P-201ENST00000516488 106 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 MIR4264-201ENST00000583520 66 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 SNORA4-201ENST00000584302 138 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 RMST_2.1-201ENST00000617263 136 ntBASIC0.44□□□□□ -2.34
NIPAL3Q6P499 SNORD45.3-201ENST00000363836 72 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.813-201ENST00000364639 102 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 RNU1-133P-201ENST00000364867 167 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 RNU6-177P-201ENST00000411257 104 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 RNU2-13P-201ENST00000515909 113 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 RNU6-475P-201ENST00000516073 104 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 PART1_1.1-201ENST00000611761 217 ntBASIC0.43□□□□□ -2.34
NIPAL3Q6P499 RNU6-1205P-201ENST00000363625 106 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.263-201ENST00000364659 114 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU6-144P-201ENST00000383951 107 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU6-125P-201ENST00000384505 107 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU6-308P-201ENST00000390957 107 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU6-130P-201ENST00000411112 103 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 SNORD83.1-201ENST00000411362 77 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.42□□□□□ -2.34
NIPAL3Q6P499 snoU13.16-201ENST00000459350 104 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 snoU13.21-201ENST00000459368 105 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 AC082651.2-201ENST00000496833 166 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU6-191P-201ENST00000516295 94 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU7-25P-201ENST00000516544 62 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
NIPAL3Q6P499 RNU6-369P-201ENST00000362515 102 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.58-201ENST00000362807 102 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 SNORD113-8-201ENST00000363497 74 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.154-201ENST00000363624 102 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 RNY3P1-201ENST00000365085 102 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.424-201ENST00000384063 103 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.547-201ENST00000384654 119 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 MIR518E-201ENST00000385252 88 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 MIR548O-201ENST00000408583 114 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 RNU7-67P-201ENST00000459003 62 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 RNU6-1170P-201ENST00000515974 106 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.41□□□□□ -2.34
NIPAL3Q6P499 AL512605.2-201ENST00000592972 256 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 AC134878.1-201ENST00000619901 243 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
NIPAL3Q6P499 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
NIPAL3Q6P499 Y_RNA.222-201ENST00000364264 102 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.241-201ENST00000364470 117 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.315-201ENST00000365117 102 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 MIR1302-11-201ENST00000408051 138 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 MIR1302-9-201ENST00000408365 138 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 MIR1302-10-201ENST00000408734 138 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 RNU6-1132P-201ENST00000459214 107 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 RNU6-764P-201ENST00000516396 105 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 RNU6-1046P-201ENST00000516538 107 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 RNU7-149P-201ENST00000516739 59 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 AL355297.3-201ENST00000604082 446 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 MIR1302-2-201ENST00000607096 138 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 MIR376A1-201ENST00000616574 68 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 AC022140.2-201ENST00000623500 188 ntBASIC0.4□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.14-201ENST00000362415 103 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.122-201ENST00000363331 96 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.197-201ENST00000364004 102 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.418-201ENST00000384029 102 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 RNU6-763P-201ENST00000390865 106 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.579-201ENST00000390939 94 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.602-201ENST00000410535 92 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 RNU7-62P-201ENST00000458856 62 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
NIPAL3Q6P499 AC022709.1-201ENST00000615967 87 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms