Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AL513534.2-201ENST00000603836 250 ntBASIC1.02□□□□□ -2.25
ZNF544Q6NX49 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
ZNF544Q6NX49 AC062037.2-201ENST00000610137 73 ntBASIC1.02□□□□□ -2.25
ZNF544Q6NX49 7SK.10-201ENST00000621414 298 ntBASIC1.02□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.20-201ENST00000362479 113 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.224-201ENST00000364308 111 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 RNU6-702P-201ENST00000364982 107 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.304-201ENST00000365011 112 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 snoU2-30.1-201ENST00000365012 70 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.416-201ENST00000384014 113 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.478-201ENST00000384358 107 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 MIR526A1-201ENST00000384897 85 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF544Q6NX49 SNRPGP14-201ENST00000435400 219 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 RNU6-917P-201ENST00000516294 104 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 SNORD45.4-201ENST00000516629 73 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 AC004817.2-201ENST00000561794 651 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 MIR4643-201ENST00000577473 78 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 MIR4778-201ENST00000577635 80 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 MIR4724-201ENST00000579485 89 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 AC008507.4-201ENST00000585464 127 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 AC011921.3-201ENST00000605540 361 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
ZNF544Q6NX49 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.242-201ENST00000364473 110 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.269-201ENST00000364685 89 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.350-201ENST00000365409 98 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 RNU6-163P-201ENST00000384396 106 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 RNU6-1065P-201ENST00000384513 106 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 MIR452-201ENST00000385020 85 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 MIR626-201ENST00000385032 94 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 SNORD41-201ENST00000386967 70 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 RNU6-651P-201ENST00000411040 105 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 PIGPP3-201ENST00000425307 415 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 AC093850.1-201ENST00000454121 251 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1□□□□□ -2.25
ZNF544Q6NX49 RPL23AP91-201ENST00000569211 455 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 MIR3149-201ENST00000584629 83 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
ZNF544Q6NX49 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.802-201ENST00000614892 130 ntBASIC1□□□□□ -2.25
ZNF544Q6NX49 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1□□□□□ -2.25
ZNF544Q6NX49 MIR367-201ENST00000362299 68 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.191-201ENST00000363972 113 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 RNU6-1138P-201ENST00000365359 106 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 SNORA8.3-201ENST00000384679 139 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 MIR1298-201ENST00000408783 112 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.590-201ENST00000410140 107 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 RNU6-383P-201ENST00000410864 94 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 COX6CP14-201ENST00000469580 174 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 RPL30P7-201ENST00000479312 323 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 RNU6-1007P-201ENST00000516586 107 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 AL512310.8-201ENST00000550183 120 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
ZNF544Q6NX49 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ZNF544Q6NX49 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.76-201ENST00000362931 109 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 RNU6-653P-201ENST00000363074 106 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.293-201ENST00000364908 93 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.539-201ENST00000384635 107 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 MLLT10P1-201ENST00000418346 262 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 AC245047.8-201ENST00000456455 284 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 RNU6-1023P-201ENST00000516137 106 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 SNORD77.4-201ENST00000516158 81 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 RNU6-830P-201ENST00000516353 107 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 AC090142.3-201ENST00000519012 385 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.98□□□□□ -2.25
ZNF544Q6NX49 MIR3937-201ENST00000580135 106 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 GHRLOS.1-201ENST00000610995 70 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 AC006441.5-201ENST00000612680 209 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 AL442067.1-201ENST00000613261 223 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 uc_338.4-201ENST00000616635 176 ntBASIC0.98□□□□□ -2.25
ZNF544Q6NX49 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ZNF544Q6NX49 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
ZNF544Q6NX49 RNU6-1084P-201ENST00000362498 107 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 SNORD14E-201ENST00000364009 85 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 RNY1-201ENST00000364228 113 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.277-201ENST00000364754 102 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 RNU6-442P-201ENST00000383968 104 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 SNORA70.7-201ENST00000384159 133 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 RNU6-574P-201ENST00000384265 107 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 MIR15B-201ENST00000385045 98 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 AL451046.2-201ENST00000403074 277 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 AL133373.1-201ENST00000497098 94 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.97□□□□□ -2.25
ZNF544Q6NX49 RNU6-322P-201ENST00000516010 103 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 Y_RNA.680-201ENST00000516441 93 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 RNU6-165P-201ENST00000517170 99 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 AL365265.1-201ENST00000621045 234 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 AC106754.2-201ENST00000623006 233 ntBASIC0.97□□□□□ -2.25
ZNF544Q6NX49 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.229-201ENST00000364347 113 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 RNU4-10P-201ENST00000364383 140 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 RNY4P28-201ENST00000365281 93 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 RNY3P5-201ENST00000384127 102 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms