Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 Pinc.1-201ENST00000616452 154 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC38Q502W7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.46□□□□□ -2.18
CCDC38Q502W7 MIR337-201ENST00000362281 93 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 Y_RNA.24-201ENST00000362508 103 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 MIR520C-201ENST00000385005 87 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC38Q502W7 AC245047.7-201ENST00000440265 293 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 AC048334.1-201ENST00000477975 159 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 SNORA31.2-201ENST00000516019 134 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 MIR4662B-201ENST00000579498 81 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 AL096861.1-201ENST00000610899 123 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.45□□□□□ -2.18
CCDC38Q502W7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC38Q502W7 Y_RNA.562-201ENST00000384695 113 ntBASIC1.44□□□□□ -2.18
CCDC38Q502W7 MTND3P2-201ENST00000438452 342 ntBASIC1.44□□□□□ -2.18
CCDC38Q502W7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.44□□□□□ -2.18
CCDC38Q502W7 SNORD77.4-201ENST00000516158 81 ntBASIC1.44□□□□□ -2.18
CCDC38Q502W7 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
CCDC38Q502W7 MIR4764-201ENST00000580680 88 ntBASIC1.44□□□□□ -2.18
CCDC38Q502W7 Y_RNA.54-201ENST00000362766 105 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 SNRPGP13-201ENST00000442212 177 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 COX6CP14-201ENST00000469580 174 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 AL133373.1-201ENST00000497098 94 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 RN7SKP164-201ENST00000516138 266 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 Y_RNA.668-201ENST00000516233 93 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 RNU6-126P-201ENST00000516685 103 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 AC019288.1-201ENST00000557918 224 ntBASIC1.43□□□□□ -2.18
CCDC38Q502W7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CCDC38Q502W7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 SNORA70.22-201ENST00000517160 124 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 MIR3192-201ENST00000584920 77 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 AL022345.2-201ENST00000606307 135 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 BX284668.6-201ENST00000606899 438 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 U4.1-201ENST00000620349 87 ntBASIC1.42□□□□□ -2.18
CCDC38Q502W7 Y_RNA.277-201ENST00000364754 102 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 SNORA25.8-201ENST00000364831 128 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 SNORA25-201ENST00000384384 134 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 AP1B1P2-201ENST00000416196 106 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 AC009474.2-201ENST00000451383 136 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 RN7SKP179-201ENST00000516126 217 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 MIR4643-201ENST00000577473 78 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 AL391903.3-201ENST00000612158 163 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 AC015726.2-201ENST00000620112 122 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 AL365265.1-201ENST00000621045 234 ntBASIC1.41□□□□□ -2.18
CCDC38Q502W7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC38Q502W7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC38Q502W7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 U8.17-201ENST00000391292 132 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC38Q502W7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC38Q502W7 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 MIR4781-201ENST00000585250 76 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 AL442067.1-201ENST00000613261 223 ntBASIC1.4□□□□□ -2.19
CCDC38Q502W7 RNY3P5-201ENST00000384127 102 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 RNU6-196P-201ENST00000384315 107 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCDC38Q502W7 RNU6-910P-201ENST00000390844 107 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC38Q502W7 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 RNU7-41P-201ENST00000515917 61 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 MIR548AR-201ENST00000582191 57 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.39□□□□□ -2.19
CCDC38Q502W7 RNA5SP48-201ENST00000363969 126 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 SNORA1.2-201ENST00000365189 134 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 RNU2-55P-201ENST00000411146 174 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 RNA5SP247-201ENST00000411181 105 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC38Q502W7 snoU13.25-201ENST00000458945 104 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 AL359821.1-201ENST00000605519 182 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 AC062037.2-201ENST00000610137 73 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 AC027335.2-201ENST00000624030 375 ntBASIC1.38□□□□□ -2.19
CCDC38Q502W7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC38Q502W7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 MIR222-201ENST00000384992 110 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 MIR616-201ENST00000385293 97 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 SNORD12-201ENST00000391002 90 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 MIR548O-201ENST00000408583 114 ntBASIC1.37□□□□□ -2.19
CCDC38Q502W7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms