Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU6-496P-201ENST00000516145 99 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 RNY3P15-201ENST00000516297 97 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-988P-201ENST00000519081 107 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.26-201ENST00000362539 101 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.183-201ENST00000363882 113 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.460-201ENST00000384255 102 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.569-201ENST00000384749 103 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 MIR215-201ENST00000384858 110 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-763P-201ENST00000390865 106 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 SNORD115-46-201ENST00000390982 71 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 MIR1185-1-201ENST00000408598 86 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-383P-201ENST00000410864 94 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 AC138907.6-201ENST00000568401 126 ntBASIC0.85□□□□□ -2.27
SHROOM1Q2M3G4 AC023934.1-201ENST00000574529 2389 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.61-201ENST00000362835 102 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.222-201ENST00000364264 102 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-442P-201ENST00000383968 104 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 MIR1252-201ENST00000408861 65 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 MTCO2P12-201ENST00000427426 682 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 MTCO1P5-201ENST00000433573 344 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 RNU7-181P-201ENST00000517234 74 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 AC012433.1-201ENST00000588916 398 ntBASIC0.84□□□□□ -2.27
SHROOM1Q2M3G4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 RNU4-90P-201ENST00000362773 141 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 RNA5SP499-201ENST00000363982 119 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.210-201ENST00000364161 110 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-268P-201ENST00000364174 107 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 SNORD38C-201ENST00000384381 69 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.535-201ENST00000384612 99 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AL603910.2-201ENST00000407268 136 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 RPL21P38-201ENST00000418090 167 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 ELOCP20-201ENST00000422460 345 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 RNU7-43P-201ENST00000516554 64 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 SNORA40.15-201ENST00000516884 107 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AL512605.2-201ENST00000592972 256 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AC015726.2-201ENST00000620112 122 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 AC008133.2-201ENST00000624540 351 ntBASIC0.83□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.128-201ENST00000363391 112 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 SNORA63.7-201ENST00000365579 123 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-662P-201ENST00000384253 104 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 AC131281.1-201ENST00000522984 164 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 AC008507.4-201ENST00000585464 127 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 Pinc.1-201ENST00000616452 154 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 MIR4251-201ENST00000635819 61 ntBASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
SHROOM1Q2M3G4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.19-201ENST00000362462 99 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.64-201ENST00000362845 102 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-1205P-201ENST00000363625 106 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.214-201ENST00000364201 112 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-654P-201ENST00000364373 107 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.541-201ENST00000384640 113 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 MIR15B-201ENST00000385045 98 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-1248P-201ENST00000391096 64 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 MIR548P-201ENST00000408336 84 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 RNA5SP95-201ENST00000410319 137 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 SNRPGP14-201ENST00000435400 219 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 SNORD11-201ENST00000459124 84 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.637-201ENST00000459424 114 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 RN7SKP164-201ENST00000516138 266 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 MIR2681-201ENST00000581814 105 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 MIR3171-201ENST00000584270 74 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 SEPT14P17-201ENST00000617978 177 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 AC134503.1-201ENST00000633048 54 ntBASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.16-201ENST00000362421 102 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 snoU2_19.2-201ENST00000363024 80 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-770P-201ENST00000363929 105 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-899P-201ENST00000363947 107 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNY1P4-201ENST00000384595 115 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 U8.17-201ENST00000391292 132 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 AC005534.2-201ENST00000431047 433 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 MTND5P22-201ENST00000458380 195 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.711-201ENST00000516993 102 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-1137P-201ENST00000517073 99 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.721-201ENST00000517207 102 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 252.3 ms