Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 MRPS17P9-201ENST00000511924 393 ntBASIC2.16□□□□□ -2.06
SCAPQ12770 AC090049.2-201ENST00000550377 109 ntBASIC2.16□□□□□ -2.06
SCAPQ12770 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.16□□□□□ -2.06
SCAPQ12770 AC008507.4-201ENST00000585464 127 ntBASIC2.16□□□□□ -2.06
SCAPQ12770 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCAPQ12770 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 SNORA1B-201ENST00000362535 133 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 RNU6-1336P-201ENST00000383886 109 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 MIR624-201ENST00000385217 97 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 FTH1P12-201ENST00000432137 551 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.15□□□□□ -2.07
SCAPQ12770 RNVU1-2-201ENST00000516326 135 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.15□□□□□ -2.07
SCAPQ12770 AL365205.2-201ENST00000594586 68 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 snoU13.31-201ENST00000607291 104 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 AL591926.4-201ENST00000616895 298 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SCAPQ12770 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.07
SCAPQ12770 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SCAPQ12770 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
SCAPQ12770 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCAPQ12770 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCAPQ12770 Y_RNA.66-201ENST00000362862 102 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 RNY1P11-201ENST00000363759 113 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 SNORD24-201ENST00000383884 75 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 Y_RNA.686-201ENST00000516548 134 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 RNU7-28P-201ENST00000516759 62 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 MIR5094-201ENST00000578766 85 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.14□□□□□ -2.07
SCAPQ12770 AC022217.4-201ENST00000604389 163 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 AC069114.2-201ENST00000604699 304 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
SCAPQ12770 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCAPQ12770 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SCAPQ12770 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.13□□□□□ -2.07
SCAPQ12770 RNU6-834P-201ENST00000362367 110 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 RNA5SP276-201ENST00000362580 94 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 U8.1-201ENST00000362843 134 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 MIR499A-201ENST00000384903 122 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 MIR489-201ENST00000384923 84 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 MIR522-201ENST00000385071 87 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAPQ12770 MTATP6P21-201ENST00000440681 189 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.13□□□□□ -2.07
SCAPQ12770 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAPQ12770 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 RNU6-659P-201ENST00000516454 104 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 MIR6895-201ENST00000613497 78 ntBASIC2.13□□□□□ -2.07
SCAPQ12770 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCAPQ12770 SNORD68-201ENST00000363214 84 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 Y_RNA.353-201ENST00000365440 108 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 SNORD72-201ENST00000390994 80 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 RNA5SP482-201ENST00000391269 118 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AL603914.1-201ENST00000401964 204 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AC245047.3-201ENST00000429428 127 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AC069257.2-201ENST00000441819 155 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.12□□□□□ -2.07
SCAPQ12770 RNA5SP82-201ENST00000516707 92 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 AC007751.1-201ENST00000529260 376 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.12□□□□□ -2.07
SCAPQ12770 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SCAPQ12770 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
SCAPQ12770 Y_RNA.81-201ENST00000362997 102 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 RNU6-888P-201ENST00000363010 101 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 SNORD14E-201ENST00000364009 85 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 RNU6-1019P-201ENST00000364424 107 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 Y_RNA.265-201ENST00000364677 108 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 RNU6-1292P-201ENST00000383856 107 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 SNRPGP13-201ENST00000442212 177 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 Y_RNA.690-201ENST00000516603 95 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 SUB1P4-201ENST00000566062 339 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 MIR4762-201ENST00000585261 75 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 MIR8070-201ENST00000616510 88 ntBASIC2.11□□□□□ -2.07
SCAPQ12770 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SCAPQ12770 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCAPQ12770 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCAPQ12770 RNU6-1084P-201ENST00000362498 107 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 U8.5-201ENST00000364528 136 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 snoU2-30.1-201ENST00000365012 70 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 RNU6-442P-201ENST00000383968 104 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 SNORD61-201ENST00000384252 73 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 Y_RNA.563-201ENST00000384707 108 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 MIR583-201ENST00000384846 75 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 RNU6-321P-201ENST00000410912 106 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 RNU6-693P-201ENST00000516134 107 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 RNU6-1270P-201ENST00000517128 108 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 MIR3129-201ENST00000581095 76 ntBASIC2.1□□□□□ -2.07
SCAPQ12770 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.1□□□□□ -2.07
SCAPQ12770 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SCAPQ12770 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SCAPQ12770 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms