Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
IRX3P78415 RNU7-110P-201ENST00000516891 62 ntBASIC0.43□□□□□ -2.34
IRX3P78415 UBE2V2P2-201ENST00000587677 504 ntBASIC0.43□□□□□ -2.34
IRX3P78415 AP000753.3-201ENST00000604083 169 ntBASIC0.43□□□□□ -2.34
IRX3P78415 AC122108.2-201ENST00000611946 526 ntBASIC0.43□□□□□ -2.34
IRX3P78415 U8.7-201ENST00000364940 136 ntBASIC0.42□□□□□ -2.34
IRX3P78415 Y_RNA.458-201ENST00000384240 102 ntBASIC0.42□□□□□ -2.34
IRX3P78415 AC236972.2-201ENST00000434979 310 ntBASIC0.42□□□□□ -2.34
IRX3P78415 RNU6-475P-201ENST00000516073 104 ntBASIC0.42□□□□□ -2.34
IRX3P78415 RNU6-976P-201ENST00000516086 111 ntBASIC0.42□□□□□ -2.34
IRX3P78415 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.42□□□□□ -2.34
IRX3P78415 RNY3P11-201ENST00000364153 102 ntBASIC0.41□□□□□ -2.34
IRX3P78415 RNU4-50P-201ENST00000364361 141 ntBASIC0.41□□□□□ -2.34
IRX3P78415 SNORA63C-201ENST00000364578 129 ntBASIC0.41□□□□□ -2.34
IRX3P78415 RNY3-201ENST00000365484 102 ntBASIC0.41□□□□□ -2.34
IRX3P78415 Y_RNA.471-201ENST00000384312 102 ntBASIC0.41□□□□□ -2.34
IRX3P78415 AF228730.4-201ENST00000421457 183 ntBASIC0.41□□□□□ -2.34
IRX3P78415 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
IRX3P78415 RNU6-966P-201ENST00000516479 104 ntBASIC0.41□□□□□ -2.34
IRX3P78415 MIR4300-201ENST00000581016 96 ntBASIC0.41□□□□□ -2.34
IRX3P78415 DEFB117-201ENST00000602356 141 ntBASIC0.41□□□□□ -2.34
IRX3P78415 SNORD113-5-201ENST00000607261 78 ntBASIC0.41□□□□□ -2.34
IRX3P78415 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
IRX3P78415 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.41□□□□□ -2.34
IRX3P78415 AL606534.2-204ENST00000635008 178 ntBASIC0.41□□□□□ -2.34
IRX3P78415 SNORD81.1-201ENST00000363064 77 ntBASIC0.4□□□□□ -2.35
IRX3P78415 SNORD28B-201ENST00000390993 75 ntBASIC0.4□□□□□ -2.35
IRX3P78415 SNORA36B-201ENST00000410438 131 ntBASIC0.4□□□□□ -2.35
IRX3P78415 AL160004.2-201ENST00000432935 350 ntBASIC0.4□□□□□ -2.35
IRX3P78415 NDUFA4P2-201ENST00000489989 244 ntBASIC0.4□□□□□ -2.35
IRX3P78415 RNU2-13P-201ENST00000515909 113 ntBASIC0.4□□□□□ -2.35
IRX3P78415 RNU6-277P-201ENST00000516272 106 ntBASIC0.4□□□□□ -2.35
IRX3P78415 RNU6-126P-201ENST00000516685 103 ntBASIC0.4□□□□□ -2.35
IRX3P78415 AC011195.1-201ENST00000578177 177 ntBASIC0.4□□□□□ -2.35
IRX3P78415 MIR4264-201ENST00000583520 66 ntBASIC0.4□□□□□ -2.35
IRX3P78415 AL355297.3-201ENST00000604082 446 ntBASIC0.4□□□□□ -2.35
IRX3P78415 uc_338.4-201ENST00000616635 176 ntBASIC0.4□□□□□ -2.35
IRX3P78415 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
IRX3P78415 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
IRX3P78415 RNU6-1335P-201ENST00000365426 107 ntBASIC0.39□□□□□ -2.35
IRX3P78415 RNU6-708P-201ENST00000384217 107 ntBASIC0.39□□□□□ -2.35
IRX3P78415 SNORD116-29-201ENST00000384516 83 ntBASIC0.39□□□□□ -2.35
IRX3P78415 MTCO2P33-201ENST00000402100 465 ntBASIC0.39□□□□□ -2.35
IRX3P78415 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
IRX3P78415 snoU13.16-201ENST00000459350 104 ntBASIC0.39□□□□□ -2.35
IRX3P78415 MIR4791-201ENST00000607666 84 ntBASIC0.39□□□□□ -2.35
IRX3P78415 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
IRX3P78415 RNU6-899P-201ENST00000363947 107 ntBASIC0.38□□□□□ -2.35
IRX3P78415 SNORA72.4-201ENST00000384174 132 ntBASIC0.38□□□□□ -2.35
IRX3P78415 RNU6-1237P-201ENST00000384777 107 ntBASIC0.38□□□□□ -2.35
IRX3P78415 RNA5SP496-201ENST00000391240 109 ntBASIC0.38□□□□□ -2.35
IRX3P78415 AL590004.1-201ENST00000405321 300 ntBASIC0.38□□□□□ -2.35
IRX3P78415 AC096644.2-201ENST00000429278 159 ntBASIC0.38□□□□□ -2.35
IRX3P78415 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.38□□□□□ -2.35
IRX3P78415 POLR2KP2-201ENST00000438155 177 ntBASIC0.38□□□□□ -2.35
IRX3P78415 MTND4LP30-201ENST00000454092 297 ntBASIC0.38□□□□□ -2.35
IRX3P78415 AC092447.9-201ENST00000603395 144 ntBASIC0.38□□□□□ -2.35
IRX3P78415 AC084781.2-201ENST00000615568 161 ntBASIC0.38□□□□□ -2.35
IRX3P78415 MIR2909-201ENST00000617113 69 ntBASIC0.38□□□□□ -2.35
IRX3P78415 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.38□□□□□ -2.35
IRX3P78415 MTND4LP32-201ENST00000636111 270 ntBASIC0.38□□□□□ -2.35
IRX3P78415 MIR1302-1-201ENST00000637932 143 ntBASIC0.38□□□□□ -2.35
IRX3P78415 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
IRX3P78415 RNU6-1115P-201ENST00000362490 106 ntBASIC0.37□□□□□ -2.35
IRX3P78415 RNU6-654P-201ENST00000364373 107 ntBASIC0.37□□□□□ -2.35
IRX3P78415 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.37□□□□□ -2.35
IRX3P78415 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.37□□□□□ -2.35
IRX3P78415 RPL23AP91-201ENST00000569211 455 ntBASIC0.37□□□□□ -2.35
IRX3P78415 AC023932.2-201ENST00000603176 175 ntBASIC0.37□□□□□ -2.35
IRX3P78415 AL132765.2-201ENST00000610812 351 ntBASIC0.37□□□□□ -2.35
IRX3P78415 AC015726.2-201ENST00000620112 122 ntBASIC0.37□□□□□ -2.35
IRX3P78415 SNORA63.7-201ENST00000365579 123 ntBASIC0.36□□□□□ -2.35
IRX3P78415 Y_RNA.383-201ENST00000383855 97 ntBASIC0.36□□□□□ -2.35
IRX3P78415 RNU6-945P-201ENST00000383947 107 ntBASIC0.36□□□□□ -2.35
IRX3P78415 SNORA24-201ENST00000384096 131 ntBASIC0.36□□□□□ -2.35
IRX3P78415 AC087499.4-201ENST00000448505 178 ntBASIC0.36□□□□□ -2.35
IRX3P78415 SNORD11-201ENST00000459124 84 ntBASIC0.36□□□□□ -2.35
IRX3P78415 RNU7-141P-201ENST00000459304 62 ntBASIC0.36□□□□□ -2.35
IRX3P78415 SNORD19B-201ENST00000459623 84 ntBASIC0.36□□□□□ -2.35
IRX3P78415 Y_RNA.681-201ENST00000516445 113 ntBASIC0.36□□□□□ -2.35
IRX3P78415 RNU4-77P-201ENST00000516692 156 ntBASIC0.36□□□□□ -2.35
IRX3P78415 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.36□□□□□ -2.35
IRX3P78415 MIR4662B-201ENST00000579498 81 ntBASIC0.36□□□□□ -2.35
IRX3P78415 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.36□□□□□ -2.35
IRX3P78415 MTND1P7-201ENST00000632801 297 ntBASIC0.36□□□□□ -2.35
IRX3P78415 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.36□□□□□ -2.35
IRX3P78415 RNU6-934P-201ENST00000365154 107 ntBASIC0.35□□□□□ -2.35
IRX3P78415 MIR573-201ENST00000384964 99 ntBASIC0.35□□□□□ -2.35
IRX3P78415 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.35□□□□□ -2.35
IRX3P78415 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
IRX3P78415 RBMX2P4-201ENST00000441256 376 ntBASIC0.35□□□□□ -2.35
IRX3P78415 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
IRX3P78415 MIR5688-201ENST00000580619 83 ntBASIC0.35□□□□□ -2.35
IRX3P78415 SNORD115-34-201ENST00000362441 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-12-201ENST00000362583 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-29-201ENST00000362834 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-9-201ENST00000362912 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-21-201ENST00000362963 81 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-14-201ENST00000363090 81 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-13-201ENST00000363358 82 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms