Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 Y_RNA.574-201ENST00000384766 95 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 RNU6-651P-201ENST00000411040 105 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.17□□□□□ -2.22
PRAMEP78395 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
PRAMEP78395 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 RNU7-181P-201ENST00000517234 74 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 Y_RNA.802-201ENST00000614892 130 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 AC008163.1-202ENST00000636004 2889 ntBASIC1.17□□□□□ -2.22
PRAMEP78395 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
PRAMEP78395 Y_RNA.164-201ENST00000363709 102 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 SNORA75.2-201ENST00000391138 150 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 Y_RNA.587-201ENST00000391210 103 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 SNORA75.3-201ENST00000391231 150 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 RNA5SP496-201ENST00000391240 109 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 U8.17-201ENST00000391292 132 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.16□□□□□ -2.22
PRAMEP78395 AC006441.5-201ENST00000612680 209 ntBASIC1.16□□□□□ -2.22
PRAMEP78395 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PRAMEP78395 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
PRAMEP78395 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 Y_RNA.176-201ENST00000363815 109 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 Y_RNA.330-201ENST00000365230 109 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 RNU6-738P-201ENST00000384531 106 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 MIR548F4-201ENST00000408515 105 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 AC063976.4-201ENST00000421971 163 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.15□□□□□ -2.23
PRAMEP78395 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
PRAMEP78395 AL021707.8-201ENST00000609428 183 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.15□□□□□ -2.23
PRAMEP78395 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.15□□□□□ -2.23
PRAMEP78395 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
PRAMEP78395 MIR103A2-201ENST00000362154 78 ntBASIC1.14□□□□□ -2.23
PRAMEP78395 SNORD116-28-201ENST00000516123 91 ntBASIC1.14□□□□□ -2.23
PRAMEP78395 RNU6-830P-201ENST00000516353 107 ntBASIC1.14□□□□□ -2.23
PRAMEP78395 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.14□□□□□ -2.23
PRAMEP78395 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.14□□□□□ -2.23
PRAMEP78395 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.14□□□□□ -2.23
PRAMEP78395 AL360085.1-201ENST00000604713 532 ntBASIC1.14□□□□□ -2.23
PRAMEP78395 AC008133.2-201ENST00000624540 351 ntBASIC1.14□□□□□ -2.23
PRAMEP78395 U6.104-201ENST00000637979 90 ntBASIC1.14□□□□□ -2.23
PRAMEP78395 Y_RNA.242-201ENST00000364473 110 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 SNORA8.3-201ENST00000384679 139 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 MIR526A2-201ENST00000390198 65 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
PRAMEP78395 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 MTCO2P24-201ENST00000515611 426 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 Y_RNA.666-201ENST00000516187 112 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 RNU7-25P-201ENST00000516544 62 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 AL117187.1-201ENST00000555482 181 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 MIR4498-201ENST00000577599 66 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 snoU13.31-201ENST00000607291 104 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 MIR4251-201ENST00000635819 61 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 AL442644.1-201ENST00000454390 3105 ntBASIC1.13□□□□□ -2.23
PRAMEP78395 Y_RNA.47-201ENST00000362697 108 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 Y_RNA.396-201ENST00000383949 103 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 MIR1185-1-201ENST00000408598 86 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.12□□□□□ -2.23
PRAMEP78395 U2.14-201ENST00000615943 113 ntBASIC1.12□□□□□ -2.23
PRAMEP78395 RNU6-1309P-201ENST00000363305 108 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 Y_RNA.370-201ENST00000365589 108 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 RNU6-472P-201ENST00000384299 107 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 Y_RNA.486-201ENST00000384398 107 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 Y_RNA.547-201ENST00000384654 119 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 MIR626-201ENST00000385032 94 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 MIR548O-201ENST00000408583 114 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 Y_RNA.590-201ENST00000410140 107 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 Y_RNA.679-201ENST00000516416 91 ntBASIC1.11□□□□□ -2.23
PRAMEP78395 MIR335-201ENST00000362173 94 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 Y_RNA.4-201ENST00000362333 112 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 RNA5SP48-201ENST00000363969 126 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 Y_RNA.229-201ENST00000364347 113 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 RNU4-57P-201ENST00000515980 135 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 SNORD77.4-201ENST00000516158 81 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 AP003716.2-201ENST00000528260 108 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.1□□□□□ -2.23
PRAMEP78395 Y_RNA.54-201ENST00000362766 105 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 RNU6-1138P-201ENST00000365359 106 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 RNU6-1067P-201ENST00000384752 107 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.09□□□□□ -2.23
PRAMEP78395 RNU6-327P-201ENST00000516270 127 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 MIR4781-201ENST00000585250 76 ntBASIC1.09□□□□□ -2.23
PRAMEP78395 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
PRAMEP78395 Y_RNA.149-201ENST00000363558 117 ntBASIC1.08□□□□□ -2.24
PRAMEP78395 SNORA51.10-201ENST00000384418 136 ntBASIC1.08□□□□□ -2.24
PRAMEP78395 MT-TT-201ENST00000387460 66 ntBASIC1.08□□□□□ -2.24
PRAMEP78395 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms