Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MTND3P8-201ENST00000412909 339 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 AC090844.1-201ENST00000422019 156 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 MIR4659A-201ENST00000580269 81 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 AC008608.1-201ENST00000603910 127 ntBASIC-0.02□□□□□ -2.41
CLDN6P56747 AC010332.2-201ENST00000613083 1904 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-747P-201ENST00000390928 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-241P-201ENST00000391148 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 SNORD115-47-201ENST00000391226 86 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-447P-201ENST00000410293 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-355P-201ENST00000410427 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-791P-201ENST00000410467 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-705P-201ENST00000410601 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-860P-201ENST00000410860 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-785P-201ENST00000411324 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU7-102P-201ENST00000458948 62 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 snoU13.16-201ENST00000459350 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU7-169P-201ENST00000459456 61 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 AC091959.1-201ENST00000495857 238 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-863P-201ENST00000515989 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-120P-201ENST00000516077 103 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU7-115P-201ENST00000516433 55 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RNU6-264P-201ENST00000517134 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 RN7SKP295-201ENST00000517264 153 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 AC144568.1-201ENST00000520139 137 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 EIF1P4-201ENST00000572664 335 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 AC006441.5-201ENST00000612680 209 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 uc_338.6-201ENST00000613544 171 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 U6.90-201ENST00000614007 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 AC134878.1-201ENST00000619901 243 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 U6.70-201ENST00000620287 104 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 AL669831.3-213ENST00000636676 183 ntBASIC-0.03□□□□□ -2.41
CLDN6P56747 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 U8.7-201ENST00000364940 136 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 RNA5SP117-201ENST00000365294 118 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.04□□□□□ -2.42
CLDN6P56747 AC005042.3-201ENST00000453230 174 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 AC107297.1-201ENST00000459991 176 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 RNU7-4P-201ENST00000516961 62 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 AC112693.2-201ENST00000556538 232 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.04□□□□□ -2.42
CLDN6P56747 MIR2681-201ENST00000581814 105 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 AL355297.3-201ENST00000604082 446 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 MIR548AY-201ENST00000617669 107 ntBASIC-0.04□□□□□ -2.42
CLDN6P56747 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
CLDN6P56747 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 MIR125B2-201ENST00000385128 89 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 SNORA75.6-201ENST00000391318 127 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 AL603910.2-201ENST00000407268 136 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 MIR1278-201ENST00000408753 81 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 PDCL2P1-201ENST00000419302 352 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLDN6P56747 AC236972.2-201ENST00000434979 310 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 MIR18B-201ENST00000454574 71 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 RPL23AP91-201ENST00000569211 455 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 MIR3678-201ENST00000578455 94 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 MIR3688-2-201ENST00000636963 87 ntBASIC-0.05□□□□□ -2.42
CLDN6P56747 SNORA42.1-201ENST00000363515 137 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 MIR1257-201ENST00000408490 117 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 AF228730.4-201ENST00000421457 183 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 AC024067.1-201ENST00000426199 223 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.06□□□□□ -2.42
CLDN6P56747 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.06□□□□□ -2.42
CLDN6P56747 RNU7-67P-201ENST00000459003 62 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.06□□□□□ -2.42
CLDN6P56747 AC091951.2-201ENST00000500762 203 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.06□□□□□ -2.42
CLDN6P56747 AL080274.1-201ENST00000605565 220 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 MIR6740-201ENST00000618268 113 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 AC048344.4-201ENST00000619744 527 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.06□□□□□ -2.42
CLDN6P56747 RNA5SP214-201ENST00000363378 118 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 RNY3P11-201ENST00000364153 102 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 MIR518F-201ENST00000384973 87 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 MIR628-201ENST00000385229 95 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 SEPT7P4-201ENST00000437076 306 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 RNU6-437P-201ENST00000459408 95 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 RNU7-156P-201ENST00000517214 74 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.07□□□□□ -2.42
CLDN6P56747 MIR4493-201ENST00000584016 73 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CLDN6P56747 DEFB117-201ENST00000602356 141 ntBASIC-0.07□□□□□ -2.42
CLDN6P56747 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.08□□□□□ -2.42
CLDN6P56747 SNORD114-9-201ENST00000364370 72 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 915.2 ms