Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC007742.2-201ENST00000618226 398 ntBASIC1.02□□□□□ -2.25
PEX3P56589 MIR8062-201ENST00000621515 85 ntBASIC1.02□□□□□ -2.25
PEX3P56589 snoU18.1-201ENST00000629629 71 ntBASIC1.02□□□□□ -2.25
PEX3P56589 RNU6-268P-201ENST00000364174 107 ntBASIC1.01□□□□□ -2.25
PEX3P56589 Y_RNA.237-201ENST00000364439 102 ntBASIC1.01□□□□□ -2.25
PEX3P56589 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
PEX3P56589 RNU6-514P-201ENST00000384208 107 ntBASIC1.01□□□□□ -2.25
PEX3P56589 Y_RNA.483-201ENST00000384380 101 ntBASIC1.01□□□□□ -2.25
PEX3P56589 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
PEX3P56589 Y_RNA.574-201ENST00000384766 95 ntBASIC1.01□□□□□ -2.25
PEX3P56589 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
PEX3P56589 MIR15B-201ENST00000385045 98 ntBASIC1.01□□□□□ -2.25
PEX3P56589 RNU6-383P-201ENST00000410864 94 ntBASIC1.01□□□□□ -2.25
PEX3P56589 AL358176.2-201ENST00000425769 204 ntBASIC1.01□□□□□ -2.25
PEX3P56589 TRBVB-201ENST00000477100 408 ntBASIC1.01□□□□□ -2.25
PEX3P56589 RPS26P48-201ENST00000491713 339 ntBASIC1.01□□□□□ -2.25
PEX3P56589 RNU6-635P-201ENST00000516651 102 ntBASIC1.01□□□□□ -2.25
PEX3P56589 DEFB108E-201ENST00000524692 240 ntBASIC1.01□□□□□ -2.25
PEX3P56589 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.01□□□□□ -2.25
PEX3P56589 PRELID3BP2-201ENST00000605362 201 ntBASIC1.01□□□□□ -2.25
PEX3P56589 AC006441.5-201ENST00000612680 209 ntBASIC1.01□□□□□ -2.25
PEX3P56589 U2.14-201ENST00000615943 113 ntBASIC1.01□□□□□ -2.25
PEX3P56589 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
PEX3P56589 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
PEX3P56589 SNORD14E-201ENST00000364009 85 ntBASIC1□□□□□ -2.25
PEX3P56589 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
PEX3P56589 MIR526A2-201ENST00000390198 65 ntBASIC1□□□□□ -2.25
PEX3P56589 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
PEX3P56589 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1□□□□□ -2.25
PEX3P56589 SNORD123-201ENST00000459473 70 ntBASIC1□□□□□ -2.25
PEX3P56589 MIR3973-201ENST00000579824 107 ntBASIC1□□□□□ -2.25
PEX3P56589 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.82-201ENST00000363000 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.92-201ENST00000363043 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.235-201ENST00000364412 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.238-201ENST00000364441 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.306-201ENST00000365015 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.312-201ENST00000365089 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.322-201ENST00000365151 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 RNU6-442P-201ENST00000383968 104 ntBASIC0.99□□□□□ -2.25
PEX3P56589 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
PEX3P56589 RNA5SP496-201ENST00000391240 109 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.650-201ENST00000459002 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.99□□□□□ -2.25
PEX3P56589 RNU7-41P-201ENST00000515917 61 ntBASIC0.99□□□□□ -2.25
PEX3P56589 SNORA31.4-201ENST00000516049 129 ntBASIC0.99□□□□□ -2.25
PEX3P56589 SNORD79.1-201ENST00000516069 84 ntBASIC0.99□□□□□ -2.25
PEX3P56589 SCARNA24.2-201ENST00000516968 130 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.777-201ENST00000516982 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.99□□□□□ -2.25
PEX3P56589 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
PEX3P56589 MIR5688-201ENST00000580619 83 ntBASIC0.99□□□□□ -2.25
PEX3P56589 MIR4719-201ENST00000585233 84 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.771-201ENST00000598668 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 Y_RNA.789-201ENST00000622480 102 ntBASIC0.99□□□□□ -2.25
PEX3P56589 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
PEX3P56589 Y_RNA.44-201ENST00000362676 108 ntBASIC0.98□□□□□ -2.25
PEX3P56589 Y_RNA.117-201ENST00000363294 101 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU6-1138P-201ENST00000365359 106 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU6-211P-201ENST00000384047 107 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU6-1289P-201ENST00000384431 106 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU6-713P-201ENST00000384761 107 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU6-910P-201ENST00000390844 107 ntBASIC0.98□□□□□ -2.25
PEX3P56589 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RPL39P39-201ENST00000455840 151 ntBASIC0.98□□□□□ -2.25
PEX3P56589 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.98□□□□□ -2.25
PEX3P56589 MTCO2P24-201ENST00000515611 426 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU4-57P-201ENST00000515980 135 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNU7-43P-201ENST00000516554 64 ntBASIC0.98□□□□□ -2.25
PEX3P56589 RNA5SP404-201ENST00000517118 132 ntBASIC0.98□□□□□ -2.25
PEX3P56589 AC100767.1-201ENST00000528178 123 ntBASIC0.98□□□□□ -2.25
PEX3P56589 MIR4764-201ENST00000580680 88 ntBASIC0.98□□□□□ -2.25
PEX3P56589 MIR4282-201ENST00000583613 67 ntBASIC0.98□□□□□ -2.25
PEX3P56589 AC008737.2-201ENST00000599446 118 ntBASIC0.98□□□□□ -2.25
PEX3P56589 AL360085.1-201ENST00000604713 532 ntBASIC0.98□□□□□ -2.25
PEX3P56589 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
PEX3P56589 RNU6-740P-201ENST00000364734 105 ntBASIC0.97□□□□□ -2.25
PEX3P56589 Y_RNA.461-201ENST00000384263 103 ntBASIC0.97□□□□□ -2.25
PEX3P56589 MIR499A-201ENST00000384903 122 ntBASIC0.97□□□□□ -2.25
PEX3P56589 RNU6-651P-201ENST00000411040 105 ntBASIC0.97□□□□□ -2.25
PEX3P56589 RN7SKP164-201ENST00000516138 266 ntBASIC0.97□□□□□ -2.25
PEX3P56589 SNORD77.4-201ENST00000516158 81 ntBASIC0.97□□□□□ -2.25
PEX3P56589 SCARNA15.1-201ENST00000516384 125 ntBASIC0.97□□□□□ -2.25
PEX3P56589 SNORA18.7-201ENST00000516910 131 ntBASIC0.97□□□□□ -2.25
PEX3P56589 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
PEX3P56589 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
PEX3P56589 uc_338.4-201ENST00000616635 176 ntBASIC0.97□□□□□ -2.25
PEX3P56589 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.96□□□□□ -2.26
PEX3P56589 Y_RNA.133-201ENST00000363428 110 ntBASIC0.96□□□□□ -2.26
PEX3P56589 Y_RNA.191-201ENST00000363972 113 ntBASIC0.96□□□□□ -2.26
PEX3P56589 RNU4-10P-201ENST00000364383 140 ntBASIC0.96□□□□□ -2.26
PEX3P56589 Y_RNA.396-201ENST00000383949 103 ntBASIC0.96□□□□□ -2.26
PEX3P56589 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
PEX3P56589 SNORA75.2-201ENST00000391138 150 ntBASIC0.96□□□□□ -2.26
PEX3P56589 SNORA75.3-201ENST00000391231 150 ntBASIC0.96□□□□□ -2.26
PEX3P56589 MIR1185-1-201ENST00000408598 86 ntBASIC0.96□□□□□ -2.26
PEX3P56589 RNU6-947P-201ENST00000516264 106 ntBASIC0.96□□□□□ -2.26
PEX3P56589 RNU7-40P-201ENST00000516397 64 ntBASIC0.96□□□□□ -2.26
PEX3P56589 RNU7-149P-201ENST00000516739 59 ntBASIC0.96□□□□□ -2.26
PEX3P56589 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 257.5 ms