Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORD41-201ENST00000386967 70 ntBASIC1.31□□□□□ -2.2
CDH11P55287 RNU6-381P-201ENST00000391259 108 ntBASIC1.31□□□□□ -2.2
CDH11P55287 SNORD77.4-201ENST00000516158 81 ntBASIC1.31□□□□□ -2.2
CDH11P55287 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
CDH11P55287 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
CDH11P55287 AC090142.3-201ENST00000519012 385 ntBASIC1.31□□□□□ -2.2
CDH11P55287 AC090049.2-201ENST00000550377 109 ntBASIC1.31□□□□□ -2.2
CDH11P55287 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH11P55287 AC006006.1-201ENST00000603082 144 ntBASIC1.31□□□□□ -2.2
CDH11P55287 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
CDH11P55287 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
CDH11P55287 RNU6-379P-201ENST00000363813 104 ntBASIC1.3□□□□□ -2.2
CDH11P55287 Y_RNA.262-201ENST00000364641 102 ntBASIC1.3□□□□□ -2.2
CDH11P55287 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.3□□□□□ -2.2
CDH11P55287 Y_RNA.626-201ENST00000411288 95 ntBASIC1.3□□□□□ -2.2
CDH11P55287 HMGN2P32-201ENST00000444648 269 ntBASIC1.3□□□□□ -2.2
CDH11P55287 RNU4-71P-201ENST00000516258 113 ntBASIC1.3□□□□□ -2.2
CDH11P55287 RNU7-149P-201ENST00000516739 59 ntBASIC1.3□□□□□ -2.2
CDH11P55287 AC019176.1-201ENST00000518519 225 ntBASIC1.3□□□□□ -2.2
CDH11P55287 AL049861.1-201ENST00000603130 150 ntBASIC1.3□□□□□ -2.2
CDH11P55287 AC006441.5-201ENST00000612680 209 ntBASIC1.3□□□□□ -2.2
CDH11P55287 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
CDH11P55287 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDH11P55287 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH11P55287 MIR337-201ENST00000362281 93 ntBASIC1.29□□□□□ -2.2
CDH11P55287 RNU6-268P-201ENST00000364174 107 ntBASIC1.29□□□□□ -2.2
CDH11P55287 MT-TT-201ENST00000387460 66 ntBASIC1.29□□□□□ -2.2
CDH11P55287 Y_RNA.618-201ENST00000410949 107 ntBASIC1.29□□□□□ -2.2
CDH11P55287 SNX2P2-201ENST00000424553 323 ntBASIC1.29□□□□□ -2.2
CDH11P55287 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
CDH11P55287 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
CDH11P55287 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH11P55287 RNY3P16-201ENST00000516338 101 ntBASIC1.29□□□□□ -2.2
CDH11P55287 RNU6-453P-201ENST00000516819 85 ntBASIC1.29□□□□□ -2.2
CDH11P55287 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
CDH11P55287 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
CDH11P55287 AC009779.6-201ENST00000603972 165 ntBASIC1.29□□□□□ -2.2
CDH11P55287 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
CDH11P55287 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
CDH11P55287 AL161722.3-201ENST00000605789 2983 ntBASIC1.29□□□□□ -2.2
CDH11P55287 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CDH11P55287 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CDH11P55287 Y_RNA.188-201ENST00000363952 111 ntBASIC1.28□□□□□ -2.2
CDH11P55287 MIR452-201ENST00000385020 85 ntBASIC1.28□□□□□ -2.2
CDH11P55287 MIR616-201ENST00000385293 97 ntBASIC1.28□□□□□ -2.2
CDH11P55287 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
CDH11P55287 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH11P55287 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
CDH11P55287 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
CDH11P55287 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
CDH11P55287 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
CDH11P55287 RNU6-442P-201ENST00000383968 104 ntBASIC1.27□□□□□ -2.21
CDH11P55287 RNY3P5-201ENST00000384127 102 ntBASIC1.27□□□□□ -2.21
CDH11P55287 Y_RNA.489-201ENST00000384410 101 ntBASIC1.27□□□□□ -2.21
CDH11P55287 SNRPGP13-201ENST00000442212 177 ntBASIC1.27□□□□□ -2.21
CDH11P55287 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH11P55287 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
CDH11P55287 RNU6-830P-201ENST00000516353 107 ntBASIC1.27□□□□□ -2.21
CDH11P55287 RNU6-1271P-201ENST00000517049 105 ntBASIC1.27□□□□□ -2.21
CDH11P55287 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDH11P55287 MIR3937-201ENST00000580135 106 ntBASIC1.27□□□□□ -2.21
CDH11P55287 MIR4308-201ENST00000580634 81 ntBASIC1.27□□□□□ -2.21
CDH11P55287 AL391903.3-201ENST00000612158 163 ntBASIC1.27□□□□□ -2.21
CDH11P55287 AL157834.3-201ENST00000615543 103 ntBASIC1.27□□□□□ -2.21
CDH11P55287 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
CDH11P55287 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
CDH11P55287 RNU4-17P-201ENST00000365598 141 ntBASIC1.26□□□□□ -2.21
CDH11P55287 RNU6-484P-201ENST00000384016 107 ntBASIC1.26□□□□□ -2.21
CDH11P55287 Y_RNA.486-201ENST00000384398 107 ntBASIC1.26□□□□□ -2.21
CDH11P55287 Y_RNA.587-201ENST00000391210 103 ntBASIC1.26□□□□□ -2.21
CDH11P55287 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.26□□□□□ -2.21
CDH11P55287 RNU6-1007P-201ENST00000516586 107 ntBASIC1.26□□□□□ -2.21
CDH11P55287 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
CDH11P55287 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH11P55287 FAM106DP-201ENST00000586416 501 ntBASIC1.26□□□□□ -2.21
CDH11P55287 GHRLOS.1-201ENST00000610995 70 ntBASIC1.26□□□□□ -2.21
CDH11P55287 Pinc.1-201ENST00000616452 154 ntBASIC1.26□□□□□ -2.21
CDH11P55287 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
CDH11P55287 Y_RNA.308-201ENST00000365043 101 ntBASIC1.25□□□□□ -2.21
CDH11P55287 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
CDH11P55287 MIR516B2-201ENST00000385190 85 ntBASIC1.25□□□□□ -2.21
CDH11P55287 MIR136-201ENST00000385207 82 ntBASIC1.25□□□□□ -2.21
CDH11P55287 RNU6-1228P-201ENST00000391014 107 ntBASIC1.25□□□□□ -2.21
CDH11P55287 RNU2-55P-201ENST00000411146 174 ntBASIC1.25□□□□□ -2.21
CDH11P55287 SNRPGP8-201ENST00000454064 226 ntBASIC1.25□□□□□ -2.21
CDH11P55287 AC005840.1-201ENST00000498412 377 ntBASIC1.25□□□□□ -2.21
CDH11P55287 RN7SKP164-201ENST00000516138 266 ntBASIC1.25□□□□□ -2.21
CDH11P55287 AC130289.1-201ENST00000577321 73 ntBASIC1.25□□□□□ -2.21
CDH11P55287 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
CDH11P55287 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.25□□□□□ -2.21
CDH11P55287 AC141273.2-201ENST00000618989 130 ntBASIC1.25□□□□□ -2.21
CDH11P55287 Y_RNA.238-201ENST00000364441 102 ntBASIC1.24□□□□□ -2.21
CDH11P55287 Y_RNA.242-201ENST00000364473 110 ntBASIC1.24□□□□□ -2.21
CDH11P55287 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
CDH11P55287 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
CDH11P55287 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
CDH11P55287 AL451046.2-201ENST00000403074 277 ntBASIC1.24□□□□□ -2.21
CDH11P55287 AL606845.1-201ENST00000404881 255 ntBASIC1.24□□□□□ -2.21
CDH11P55287 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.24□□□□□ -2.21
CDH11P55287 AC023449.1-201ENST00000454464 154 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms