Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC013791.1-201ENST00000616619 62 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 MIR6779-201ENST00000617283 64 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 snoU18.1-201ENST00000629629 71 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 Y_RNA.133-201ENST00000363428 110 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 SNORA2.2-201ENST00000365473 135 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 Y_RNA.459-201ENST00000384251 102 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HMGCS2P54868 MIR1298-201ENST00000408783 112 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 MTND4LP30-201ENST00000454092 297 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 SNORD11-201ENST00000459124 84 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.07□□□□□ -2.24
HMGCS2P54868 RNU6-327P-201ENST00000516270 127 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 MIR5692C2-201ENST00000577959 77 ntBASIC1.07□□□□□ -2.24
HMGCS2P54868 Y_RNA.47-201ENST00000362697 108 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 Y_RNA.275-201ENST00000364726 110 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 Y_RNA.396-201ENST00000383949 103 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 MIR568-201ENST00000385036 95 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HMGCS2P54868 RNU6-131P-201ENST00000391144 107 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 RNU6-651P-201ENST00000411040 105 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 BTF3P11-201ENST00000426582 477 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGCS2P54868 AC037487.3-201ENST00000606668 112 ntBASIC1.06□□□□□ -2.24
HMGCS2P54868 MIR335-201ENST00000362173 94 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 Y_RNA.117-201ENST00000363294 101 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RNU6-1309P-201ENST00000363305 108 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 Y_RNA.162-201ENST00000363683 102 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 Y_RNA.176-201ENST00000363815 109 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RNU6-144P-201ENST00000383951 107 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RNU6-713P-201ENST00000384761 107 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RNU6-383P-201ENST00000410864 94 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 SNRPGP14-201ENST00000435400 219 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 AC090142.3-201ENST00000519012 385 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGCS2P54868 RPL23AP91-201ENST00000569211 455 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 AL353621.2-201ENST00000605340 133 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 GHRLOS.1-201ENST00000610995 70 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
HMGCS2P54868 RNA5SP327-201ENST00000362494 101 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 RNU6-1084P-201ENST00000362498 107 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 Y_RNA.36-201ENST00000362602 112 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 RNU6-1205P-201ENST00000363625 106 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 RNU6-740P-201ENST00000364734 105 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 snoU2-30.1-201ENST00000365012 70 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 Y_RNA.336-201ENST00000365307 109 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 RNU6-514P-201ENST00000384208 107 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 Y_RNA.461-201ENST00000384263 103 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 RNU6-1289P-201ENST00000384431 106 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 AL603910.2-201ENST00000407268 136 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 MIR1302-6-201ENST00000408466 90 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGCS2P54868 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGCS2P54868 RNU6-1132P-201ENST00000459214 107 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 AC008507.4-201ENST00000585464 127 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 AL021707.8-201ENST00000609428 183 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGCS2P54868 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.04□□□□□ -2.24
HMGCS2P54868 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.04□□□□□ -2.24
HMGCS2P54868 Y_RNA.44-201ENST00000362676 108 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 RNU6-211P-201ENST00000384047 107 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 MIR452-201ENST00000385020 85 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 MIR516B2-201ENST00000385190 85 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 SNORD72-201ENST00000390994 80 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 MTCO2P24-201ENST00000515611 426 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGCS2P54868 MIR2681-201ENST00000581814 105 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 JPX_2.1-201ENST00000614161 69 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 U2.14-201ENST00000615943 113 ntBASIC1.03□□□□□ -2.24
HMGCS2P54868 RNU4-10P-201ENST00000364383 140 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 AL451046.2-201ENST00000403074 277 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 MTCYBP9-201ENST00000431021 303 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 AC245047.8-201ENST00000456455 284 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 SNORD2.1-201ENST00000458762 69 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 AL133373.1-201ENST00000497098 94 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGCS2P54868 RNU6-1045P-201ENST00000516321 107 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 MIR4643-201ENST00000577473 78 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 AC012433.1-201ENST00000588916 398 ntBASIC1.02□□□□□ -2.25
HMGCS2P54868 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMGCS2P54868 Y_RNA.82-201ENST00000363000 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.92-201ENST00000363043 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.149-201ENST00000363558 117 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.235-201ENST00000364412 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.306-201ENST00000365015 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.312-201ENST00000365089 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.322-201ENST00000365151 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.572-201ENST00000384757 98 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 HMGN2P32-201ENST00000444648 269 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.650-201ENST00000459002 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 RNU6-322P-201ENST00000516010 103 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.777-201ENST00000516982 102 ntBASIC1.01□□□□□ -2.25
HMGCS2P54868 Y_RNA.714-201ENST00000517065 90 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms