Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 Y_RNA.269-201ENST00000364685 89 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNA5SP517-201ENST00000364724 117 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU6-1040P-201ENST00000383974 107 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 Y_RNA.547-201ENST00000384654 119 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 Y_RNA.551-201ENST00000384661 102 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 MIR520F-201ENST00000384824 87 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 MIR216A-201ENST00000385063 110 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNY4P36-201ENST00000391116 96 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU4-30P-201ENST00000410245 143 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 SNORA36B-201ENST00000410438 131 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU6-130P-201ENST00000411112 103 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 AC099799.1-201ENST00000439809 192 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU7-152P-201ENST00000458982 64 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 Y_RNA.673-201ENST00000516306 88 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU7-25P-201ENST00000516544 62 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 Y_RNA.718-201ENST00000517110 102 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.16□□□□□ -2.38
ZNF140P52738 MIR4771-2-201ENST00000577758 74 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 MIR4771-1-201ENST00000582617 74 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 MIR4676-201ENST00000583078 72 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 MIR4264-201ENST00000583520 66 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 PART1_1.1-201ENST00000611761 217 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 JPX_2.1-201ENST00000614161 69 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 AC007742.2-201ENST00000618226 398 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 AC022140.2-201ENST00000623500 188 ntBASIC0.16□□□□□ -2.38
ZNF140P52738 RNU4-80P-201ENST00000363200 141 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 Y_RNA.390-201ENST00000383932 102 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 RNU6-937P-201ENST00000384325 106 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 RNU6-913P-201ENST00000390913 95 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 RNU6-876P-201ENST00000391295 104 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 RNU6-938P-201ENST00000411285 103 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 RNU6-977P-201ENST00000516411 103 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 SNORA20.3-201ENST00000516880 132 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.15□□□□□ -2.39
ZNF140P52738 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 MIR8055-201ENST00000610739 97 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 uc_338.4-201ENST00000616635 176 ntBASIC0.15□□□□□ -2.39
ZNF140P52738 Y_RNA.5-201ENST00000362334 102 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 Y_RNA.418-201ENST00000384029 102 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 SNORD63-201ENST00000384262 68 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 MIR628-201ENST00000385229 95 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 SNORD100-201ENST00000408573 76 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 RNU6-847P-201ENST00000411115 108 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 MTND1P14-201ENST00000427400 950 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
ZNF140P52738 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.14□□□□□ -2.39
ZNF140P52738 Y_RNA.80-201ENST00000362996 102 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 Y_RNA.222-201ENST00000364264 102 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 Y_RNA.485-201ENST00000384395 102 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 MIR548A2-201ENST00000384956 97 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 MIR518A1-201ENST00000385068 85 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 RBMX2P4-201ENST00000441256 376 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 RNU6-191P-201ENST00000516295 94 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 RNA5SP94-201ENST00000516917 108 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 AC090897.1-201ENST00000580909 226 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 AP000753.3-201ENST00000604083 169 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 AC011373.1-201ENST00000607270 237 ntBASIC0.13□□□□□ -2.39
ZNF140P52738 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
ZNF140P52738 Y_RNA.383-201ENST00000383855 97 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 RNU6-102P-201ENST00000384485 104 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 MIR563-201ENST00000385080 79 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 RNU6-308P-201ENST00000390957 107 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 Y_RNA.587-201ENST00000391210 103 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 MIR548O-201ENST00000408583 114 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 AC138393.2-201ENST00000414742 246 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.12□□□□□ -2.39
ZNF140P52738 SNRPGP12-201ENST00000449481 213 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 RNU7-62P-201ENST00000458856 62 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 snoU13.16-201ENST00000459350 104 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 RNU7-110P-201ENST00000516891 62 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.12□□□□□ -2.39
ZNF140P52738 AL080274.1-201ENST00000605565 220 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 AL121655.1-201ENST00000605811 308 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 AL132765.2-201ENST00000610812 351 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 Z97988.1-201ENST00000637697 135 ntBASIC0.12□□□□□ -2.39
ZNF140P52738 AC010332.2-201ENST00000613083 1904 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 Y_RNA.143-201ENST00000363520 106 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 SNORD118-201ENST00000363593 134 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 Y_RNA.252-201ENST00000364556 101 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 SNORA1.2-201ENST00000365189 134 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 RNU6-1283P-201ENST00000365314 105 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 RNU4-45P-201ENST00000365469 141 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 Y_RNA.387-201ENST00000383918 102 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 RNU6-1190P-201ENST00000410811 104 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 RNU6-383P-201ENST00000410864 94 ntBASIC0.11□□□□□ -2.39
ZNF140P52738 HMGN1P33-201ENST00000432945 451 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms