Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.8□□□□□ -2.28
GPC3P51654 AC008507.4-201ENST00000585464 127 ntBASIC0.8□□□□□ -2.28
GPC3P51654 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
GPC3P51654 AL442644.1-201ENST00000454390 3105 ntBASIC0.8□□□□□ -2.28
GPC3P51654 RNU6-1205P-201ENST00000363625 106 ntBASIC0.79□□□□□ -2.28
GPC3P51654 Y_RNA.202-201ENST00000364083 110 ntBASIC0.79□□□□□ -2.28
GPC3P51654 RNU6-801P-201ENST00000364087 105 ntBASIC0.79□□□□□ -2.28
GPC3P51654 SNORA1.2-201ENST00000365189 134 ntBASIC0.79□□□□□ -2.28
GPC3P51654 RNU6-290P-201ENST00000365212 101 ntBASIC0.79□□□□□ -2.28
GPC3P51654 RNU6-326P-201ENST00000365480 107 ntBASIC0.79□□□□□ -2.28
GPC3P51654 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
GPC3P51654 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
GPC3P51654 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.79□□□□□ -2.28
GPC3P51654 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
GPC3P51654 MTCO2P12-201ENST00000427426 682 ntBASIC0.79□□□□□ -2.28
GPC3P51654 HSPE1P25-201ENST00000455484 251 ntBASIC0.79□□□□□ -2.28
GPC3P51654 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.79□□□□□ -2.28
GPC3P51654 Y_RNA.711-201ENST00000516993 102 ntBASIC0.79□□□□□ -2.28
GPC3P51654 AC133485.1-201ENST00000567176 124 ntBASIC0.79□□□□□ -2.28
GPC3P51654 AC138907.6-201ENST00000568401 126 ntBASIC0.79□□□□□ -2.28
GPC3P51654 RPL23AP91-201ENST00000569211 455 ntBASIC0.79□□□□□ -2.28
GPC3P51654 MIR3192-201ENST00000584920 77 ntBASIC0.79□□□□□ -2.28
GPC3P51654 RAC1P9-201ENST00000604990 392 ntBASIC0.79□□□□□ -2.28
GPC3P51654 Pinc.1-201ENST00000616452 154 ntBASIC0.79□□□□□ -2.28
GPC3P51654 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.79□□□□□ -2.28
GPC3P51654 MIR103A2-201ENST00000362154 78 ntBASIC0.78□□□□□ -2.28
GPC3P51654 SNORA25.1-201ENST00000362326 128 ntBASIC0.78□□□□□ -2.28
GPC3P51654 Y_RNA.418-201ENST00000384029 102 ntBASIC0.78□□□□□ -2.28
GPC3P51654 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
GPC3P51654 RNA5SP496-201ENST00000391240 109 ntBASIC0.78□□□□□ -2.28
GPC3P51654 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
GPC3P51654 SCARNA8-201ENST00000515924 131 ntBASIC0.78□□□□□ -2.28
GPC3P51654 RNU6-764P-201ENST00000516396 105 ntBASIC0.78□□□□□ -2.28
GPC3P51654 RNU2-31P-201ENST00000516954 155 ntBASIC0.78□□□□□ -2.28
GPC3P51654 MIR5688-201ENST00000580619 83 ntBASIC0.78□□□□□ -2.28
GPC3P51654 AC005357.1-201ENST00000588399 301 ntBASIC0.78□□□□□ -2.28
GPC3P51654 SEPT14P17-201ENST00000617978 177 ntBASIC0.78□□□□□ -2.28
GPC3P51654 Y_RNA.14-201ENST00000362415 103 ntBASIC0.77□□□□□ -2.29
GPC3P51654 RNU6-770P-201ENST00000363929 105 ntBASIC0.77□□□□□ -2.29
GPC3P51654 RNU6-450P-201ENST00000364654 107 ntBASIC0.77□□□□□ -2.29
GPC3P51654 SNORA22B-201ENST00000383876 138 ntBASIC0.77□□□□□ -2.29
GPC3P51654 Y_RNA.540-201ENST00000384638 111 ntBASIC0.77□□□□□ -2.29
GPC3P51654 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
GPC3P51654 MTCO2P33-201ENST00000402100 465 ntBASIC0.77□□□□□ -2.29
GPC3P51654 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
GPC3P51654 MTCO1P5-201ENST00000433573 344 ntBASIC0.77□□□□□ -2.29
GPC3P51654 RNU6-126P-201ENST00000516685 103 ntBASIC0.77□□□□□ -2.29
GPC3P51654 AC104465.1-201ENST00000611365 139 ntBASIC0.77□□□□□ -2.29
GPC3P51654 AC006441.5-201ENST00000612680 209 ntBASIC0.77□□□□□ -2.29
GPC3P51654 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
GPC3P51654 MTND4P29-201ENST00000503122 1372 ntBASIC0.76□□□□□ -2.29
GPC3P51654 RNU6-268P-201ENST00000364174 107 ntBASIC0.76□□□□□ -2.29
GPC3P51654 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
GPC3P51654 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
GPC3P51654 SNORA26.5-201ENST00000391215 123 ntBASIC0.76□□□□□ -2.29
GPC3P51654 Y_RNA.604-201ENST00000410574 102 ntBASIC0.76□□□□□ -2.29
GPC3P51654 SNORD11-201ENST00000459124 84 ntBASIC0.76□□□□□ -2.29
GPC3P51654 RNU6-1132P-201ENST00000459214 107 ntBASIC0.76□□□□□ -2.29
GPC3P51654 AC010655.3-201ENST00000478818 450 ntBASIC0.76□□□□□ -2.29
GPC3P51654 NDUFA4P2-201ENST00000489989 244 ntBASIC0.76□□□□□ -2.29
GPC3P51654 AP003716.2-201ENST00000528260 108 ntBASIC0.76□□□□□ -2.29
GPC3P51654 AC004812.1-201ENST00000540773 146 ntBASIC0.76□□□□□ -2.29
GPC3P51654 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
GPC3P51654 AC013791.1-201ENST00000616619 62 ntBASIC0.76□□□□□ -2.29
GPC3P51654 AC008133.2-201ENST00000624540 351 ntBASIC0.76□□□□□ -2.29
GPC3P51654 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
GPC3P51654 Y_RNA.11-201ENST00000362375 109 ntBASIC0.75□□□□□ -2.29
GPC3P51654 Y_RNA.330-201ENST00000365230 109 ntBASIC0.75□□□□□ -2.29
GPC3P51654 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
GPC3P51654 RNU2-14P-201ENST00000411053 191 ntBASIC0.75□□□□□ -2.29
GPC3P51654 SNRPGP14-201ENST00000435400 219 ntBASIC0.75□□□□□ -2.29
GPC3P51654 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.75□□□□□ -2.29
GPC3P51654 RNU7-41P-201ENST00000515917 61 ntBASIC0.75□□□□□ -2.29
GPC3P51654 RNY3P15-201ENST00000516297 97 ntBASIC0.75□□□□□ -2.29
GPC3P51654 AC131281.1-201ENST00000522984 164 ntBASIC0.75□□□□□ -2.29
GPC3P51654 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.75□□□□□ -2.29
GPC3P51654 MIR4662B-201ENST00000579498 81 ntBASIC0.75□□□□□ -2.29
GPC3P51654 MIR3171-201ENST00000584270 74 ntBASIC0.75□□□□□ -2.29
GPC3P51654 MIR4251-201ENST00000635819 61 ntBASIC0.75□□□□□ -2.29
GPC3P51654 MIR367-201ENST00000362299 68 ntBASIC0.74□□□□□ -2.29
GPC3P51654 Y_RNA.19-201ENST00000362462 99 ntBASIC0.74□□□□□ -2.29
GPC3P51654 RNU6-1048P-201ENST00000364054 107 ntBASIC0.74□□□□□ -2.29
GPC3P51654 RNU6-102P-201ENST00000384485 104 ntBASIC0.74□□□□□ -2.29
GPC3P51654 Y_RNA.537-201ENST00000384626 109 ntBASIC0.74□□□□□ -2.29
GPC3P51654 RNU6-763P-201ENST00000390865 106 ntBASIC0.74□□□□□ -2.29
GPC3P51654 U8.17-201ENST00000391292 132 ntBASIC0.74□□□□□ -2.29
GPC3P51654 AC113618.1-201ENST00000416747 285 ntBASIC0.74□□□□□ -2.29
GPC3P51654 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.74□□□□□ -2.29
GPC3P51654 MRPS35P2-201ENST00000508242 191 ntBASIC0.74□□□□□ -2.29
GPC3P51654 MIR5692C2-201ENST00000577959 77 ntBASIC0.74□□□□□ -2.29
GPC3P51654 MIR4724-201ENST00000579485 89 ntBASIC0.74□□□□□ -2.29
GPC3P51654 AC113195.1-201ENST00000579952 141 ntBASIC0.74□□□□□ -2.29
GPC3P51654 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
GPC3P51654 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
GPC3P51654 AL353765.1-201ENST00000605514 183 ntBASIC0.74□□□□□ -2.29
GPC3P51654 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
GPC3P51654 AC134026.1-201ENST00000623249 2239 ntBASIC0.73□□□□□ -2.29
GPC3P51654 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.73□□□□□ -2.29
GPC3P51654 RPS26P5-201ENST00000418544 335 ntBASIC0.73□□□□□ -2.29
GPC3P51654 AL731563.1-201ENST00000442202 214 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 1930.3 ms