Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-310P-201ENST00000384655 107 ntBASIC0.07□□□□□ -2.4
RFC3P40938 SNORD72-201ENST00000390994 80 ntBASIC0.07□□□□□ -2.4
RFC3P40938 MIR548F1-201ENST00000408667 84 ntBASIC0.07□□□□□ -2.4
RFC3P40938 RNU4-14P-201ENST00000410858 122 ntBASIC0.07□□□□□ -2.4
RFC3P40938 AC090844.1-201ENST00000422019 156 ntBASIC0.07□□□□□ -2.4
RFC3P40938 AC090897.1-201ENST00000580909 226 ntBASIC0.07□□□□□ -2.4
RFC3P40938 AC098679.4-201ENST00000624241 654 ntBASIC0.07□□□□□ -2.4
RFC3P40938 RNU6-674P-201ENST00000363831 107 ntBASIC0.06□□□□□ -2.4
RFC3P40938 RNY3P11-201ENST00000364153 102 ntBASIC0.06□□□□□ -2.4
RFC3P40938 MIR628-201ENST00000385229 95 ntBASIC0.06□□□□□ -2.4
RFC3P40938 Y_RNA.599-201ENST00000410489 109 ntBASIC0.06□□□□□ -2.4
RFC3P40938 Y_RNA.635-201ENST00000459041 101 ntBASIC0.06□□□□□ -2.4
RFC3P40938 RNU6-437P-201ENST00000459408 95 ntBASIC0.06□□□□□ -2.4
RFC3P40938 AC091959.1-201ENST00000495857 238 ntBASIC0.06□□□□□ -2.4
RFC3P40938 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
RFC3P40938 SNORA18.4-201ENST00000516440 124 ntBASIC0.06□□□□□ -2.4
RFC3P40938 Y_RNA.691-201ENST00000516611 103 ntBASIC0.06□□□□□ -2.4
RFC3P40938 RPL23AP91-201ENST00000569211 455 ntBASIC0.06□□□□□ -2.4
RFC3P40938 DEFB117-201ENST00000602356 141 ntBASIC0.06□□□□□ -2.4
RFC3P40938 AL355297.3-201ENST00000604082 446 ntBASIC0.06□□□□□ -2.4
RFC3P40938 AL080274.1-201ENST00000605565 220 ntBASIC0.06□□□□□ -2.4
RFC3P40938 AC138305.3-201ENST00000624988 240 ntBASIC0.06□□□□□ -2.4
RFC3P40938 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
RFC3P40938 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
RFC3P40938 RNU6-1188P-201ENST00000363795 107 ntBASIC0.05□□□□□ -2.4
RFC3P40938 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
RFC3P40938 MIR18B-201ENST00000454574 71 ntBASIC0.05□□□□□ -2.4
RFC3P40938 AC107297.1-201ENST00000459991 176 ntBASIC0.05□□□□□ -2.4
RFC3P40938 RNU6-718P-201ENST00000516166 105 ntBASIC0.05□□□□□ -2.4
RFC3P40938 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
RFC3P40938 MIR5690-201ENST00000583739 73 ntBASIC0.05□□□□□ -2.4
RFC3P40938 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
RFC3P40938 SNORA25.18-201ENST00000607153 114 ntBASIC0.05□□□□□ -2.4
RFC3P40938 SNORD81.1-201ENST00000363064 77 ntBASIC0.04□□□□□ -2.4
RFC3P40938 Y_RNA.331-201ENST00000365267 102 ntBASIC0.04□□□□□ -2.4
RFC3P40938 RNU6-890P-201ENST00000384121 107 ntBASIC0.04□□□□□ -2.4
RFC3P40938 RNU6-708P-201ENST00000384217 107 ntBASIC0.04□□□□□ -2.4
RFC3P40938 Y_RNA.462-201ENST00000384268 102 ntBASIC0.04□□□□□ -2.4
RFC3P40938 MIR1278-201ENST00000408753 81 ntBASIC0.04□□□□□ -2.4
RFC3P40938 SNORD11-201ENST00000459124 84 ntBASIC0.04□□□□□ -2.4
RFC3P40938 RNU6-358P-201ENST00000516564 75 ntBASIC0.04□□□□□ -2.4
RFC3P40938 AC069113.3-201ENST00000521019 150 ntBASIC0.04□□□□□ -2.4
RFC3P40938 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.04□□□□□ -2.4
RFC3P40938 uc_338.6-201ENST00000613544 171 ntBASIC0.04□□□□□ -2.4
RFC3P40938 RNU4-50P-201ENST00000364361 141 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-1215P-201ENST00000384441 102 ntBASIC0.03□□□□□ -2.4
RFC3P40938 MIR125B2-201ENST00000385128 89 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-1319P-201ENST00000390855 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-747P-201ENST00000390928 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-241P-201ENST00000391148 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-447P-201ENST00000410293 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-1118P-201ENST00000410382 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-1076P-201ENST00000410397 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-355P-201ENST00000410427 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 SNORA36B-201ENST00000410438 131 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-791P-201ENST00000410467 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-705P-201ENST00000410601 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-1100P-201ENST00000410691 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-860P-201ENST00000410860 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-370P-201ENST00000411008 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-1217P-201ENST00000411276 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 RNU6-785P-201ENST00000411324 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 AC073261.1-201ENST00000429409 121 ntBASIC0.03□□□□□ -2.4
RFC3P40938 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.03□□□□□ -2.4
RFC3P40938 AC069439.1-201ENST00000494739 167 ntBASIC0.03□□□□□ -2.4
RFC3P40938 AC008608.1-201ENST00000603910 127 ntBASIC0.03□□□□□ -2.4
RFC3P40938 U6.90-201ENST00000614007 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.03□□□□□ -2.4
RFC3P40938 AC134878.1-201ENST00000619901 243 ntBASIC0.03□□□□□ -2.4
RFC3P40938 U6.70-201ENST00000620287 104 ntBASIC0.03□□□□□ -2.4
RFC3P40938 AC067863.3-201ENST00000624172 122 ntBASIC0.03□□□□□ -2.4
RFC3P40938 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.03□□□□□ -2.4
RFC3P40938 Y_RNA.314-201ENST00000365114 102 ntBASIC0.02□□□□□ -2.41
RFC3P40938 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
RFC3P40938 SNORA8.2-201ENST00000384372 139 ntBASIC0.02□□□□□ -2.41
RFC3P40938 RNU6-364P-201ENST00000384387 107 ntBASIC0.02□□□□□ -2.41
RFC3P40938 AC236972.2-201ENST00000434979 310 ntBASIC0.02□□□□□ -2.41
RFC3P40938 AC099799.1-201ENST00000439809 192 ntBASIC0.02□□□□□ -2.41
RFC3P40938 RNU7-102P-201ENST00000458948 62 ntBASIC0.02□□□□□ -2.41
RFC3P40938 MTND4P17-201ENST00000470444 350 ntBASIC0.02□□□□□ -2.41
RFC3P40938 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.02□□□□□ -2.41
RFC3P40938 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.02□□□□□ -2.41
RFC3P40938 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
RFC3P40938 AC010205.1-201ENST00000616668 449 ntBASIC0.02□□□□□ -2.41
RFC3P40938 MIR6740-201ENST00000618268 113 ntBASIC0.02□□□□□ -2.41
RFC3P40938 AC010332.2-201ENST00000613083 1904 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-34-201ENST00000362441 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-12-201ENST00000362583 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-29-201ENST00000362834 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-9-201ENST00000362912 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-21-201ENST00000362963 81 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-14-201ENST00000363090 81 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-13-201ENST00000363358 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-41-201ENST00000363608 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-11-201ENST00000363616 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-5-201ENST00000363633 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-39-201ENST00000363694 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 Y_RNA.166-201ENST00000363730 102 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-4-201ENST00000363810 82 ntBASIC0.01□□□□□ -2.41
RFC3P40938 SNORD115-16-201ENST00000363887 82 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms