Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC091959.1-201ENST00000495857 238 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 RN7SKP164-201ENST00000516138 266 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 AP003733.2-201ENST00000529409 171 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
HOXD13P35453 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXD13P35453 snoU2_19.2-201ENST00000363024 80 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 Y_RNA.164-201ENST00000363709 102 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 Y_RNA.541-201ENST00000384640 113 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 MIR1185-1-201ENST00000408598 86 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.01□□□□□ -2.25
HOXD13P35453 BTF3P11-201ENST00000426582 477 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 AC107297.1-201ENST00000459991 176 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 AC098869.1-201ENST00000481627 292 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 SNORA27.4-201ENST00000516650 95 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 uc_338.4-201ENST00000616635 176 ntBASIC1.01□□□□□ -2.25
HOXD13P35453 SNORA51.10-201ENST00000384418 136 ntBASIC1□□□□□ -2.25
HOXD13P35453 Y_RNA.537-201ENST00000384626 109 ntBASIC1□□□□□ -2.25
HOXD13P35453 AL731563.1-201ENST00000442202 214 ntBASIC1□□□□□ -2.25
HOXD13P35453 RNU6-126P-201ENST00000516685 103 ntBASIC1□□□□□ -2.25
HOXD13P35453 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
HOXD13P35453 MIR4662B-201ENST00000579498 81 ntBASIC1□□□□□ -2.25
HOXD13P35453 MIR5688-201ENST00000580619 83 ntBASIC1□□□□□ -2.25
HOXD13P35453 AC136443.5-201ENST00000603741 370 ntBASIC1□□□□□ -2.25
HOXD13P35453 AC022140.2-201ENST00000623500 188 ntBASIC1□□□□□ -2.25
HOXD13P35453 Y_RNA.216-201ENST00000364205 93 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 AL603910.2-201ENST00000407268 136 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 AC005534.2-201ENST00000431047 433 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.99□□□□□ -2.25
HOXD13P35453 AC067940.1-201ENST00000458411 300 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 Y_RNA.701-201ENST00000516812 110 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 AC131055.1-201ENST00000584626 316 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 MIR8070-201ENST00000616510 88 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.99□□□□□ -2.25
HOXD13P35453 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
HOXD13P35453 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HOXD13P35453 SNORA33.2-201ENST00000365413 134 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 MIR215-201ENST00000384858 110 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 SNORD28B-201ENST00000390993 75 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 SNORD111-201ENST00000408139 94 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 RNU6-985P-201ENST00000410182 104 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 RNU6-383P-201ENST00000410864 94 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 RNU6-847P-201ENST00000411115 108 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 RPS3AP1-201ENST00000413190 320 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 RPL21P38-201ENST00000418090 167 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.98□□□□□ -2.25
HOXD13P35453 MIR2115-201ENST00000516657 100 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 RNU7-149P-201ENST00000516739 59 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 AC109810.1-201ENST00000534066 224 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 AC023827.1-201ENST00000569247 97 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 AL020996.3-201ENST00000606617 222 ntBASIC0.98□□□□□ -2.25
HOXD13P35453 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
HOXD13P35453 Y_RNA.64-201ENST00000362845 102 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 RNU6-396P-201ENST00000365369 105 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 RNU6-662P-201ENST00000384253 104 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 MIR526A2-201ENST00000390198 65 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 RNU2-64P-201ENST00000411315 191 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXD13P35453 RNU7-181P-201ENST00000517234 74 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.97□□□□□ -2.25
HOXD13P35453 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 Y_RNA.802-201ENST00000614892 130 ntBASIC0.97□□□□□ -2.25
HOXD13P35453 Y_RNA.217-201ENST00000364214 105 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 RNU6-1138P-201ENST00000365359 106 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 Y_RNA.422-201ENST00000384054 114 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 AL392103.1-201ENST00000447000 198 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 Y_RNA.641-201ENST00000459414 105 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.96□□□□□ -2.26
HOXD13P35453 SERF1AP1-201ENST00000514575 187 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 AC006006.1-201ENST00000603082 144 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 AL049861.1-201ENST00000603130 150 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 AL021707.8-201ENST00000609428 183 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 AC106800.4-201ENST00000614905 153 ntBASIC0.96□□□□□ -2.26
HOXD13P35453 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HOXD13P35453 Y_RNA.84-201ENST00000363011 104 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 SNORD113.3-201ENST00000364630 78 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 RNU6-806P-201ENST00000365147 105 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 RNU6-994P-201ENST00000410507 111 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 U7.7-201ENST00000459276 60 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 AC025627.3-201ENST00000582078 182 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.95□□□□□ -2.26
HOXD13P35453 UBE2WP1-201ENST00000362030 340 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 MIR337-201ENST00000362281 93 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 Y_RNA.153-201ENST00000363615 91 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 RNU6-713P-201ENST00000384761 107 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 MIR570-201ENST00000384917 97 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 MIR548O-201ENST00000408583 114 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 RNU4-57P-201ENST00000515980 135 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 Y_RNA.676-201ENST00000516393 96 ntBASIC0.94□□□□□ -2.26
HOXD13P35453 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms