Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 SNORD115-40-201ENST00000606510 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 AC092954.2-201ENST00000609103 430 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 AC005609.4-201ENST00000625071 447 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU6-595P-201ENST00000363944 107 ntBASIC-1□□□□□ -2.57
SDC4P31431 SNORD37.1-201ENST00000390968 65 ntBASIC-1□□□□□ -2.57
SDC4P31431 RNU6-192P-201ENST00000391253 100 ntBASIC-1□□□□□ -2.57
SDC4P31431 MTCO2P8-201ENST00000412213 658 ntBASIC-1□□□□□ -2.57
SDC4P31431 AL353193.1-201ENST00000421444 268 ntBASIC-1□□□□□ -2.57
SDC4P31431 USMG5P1-201ENST00000425964 177 ntBASIC-1□□□□□ -2.57
SDC4P31431 RNU2-11P-201ENST00000459191 187 ntBASIC-1□□□□□ -2.57
SDC4P31431 RNA5SP401-201ENST00000515920 127 ntBASIC-1□□□□□ -2.57
SDC4P31431 RNA5SP66-201ENST00000517178 101 ntBASIC-1□□□□□ -2.57
SDC4P31431 AC004223.4-201ENST00000612426 332 ntBASIC-1□□□□□ -2.57
SDC4P31431 AL662814.1-201ENST00000617364 121 ntBASIC-1□□□□□ -2.57
SDC4P31431 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
SDC4P31431 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 SNORD110-201ENST00000408189 75 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.01□□□□□ -2.57
SDC4P31431 AC011352.1-201ENST00000512300 793 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 RNU6-966P-201ENST00000516479 104 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 AP003461.1-201ENST00000528866 78 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 AL596211.1-201ENST00000569873 2277 ntBASIC-1.01□□□□□ -2.57
SDC4P31431 RNU6-254P-201ENST00000363377 107 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 SNORA40.4-201ENST00000390971 128 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 RNU6-735P-201ENST00000410612 107 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 AC006210.1-201ENST00000424882 111 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 RNU7-104P-201ENST00000459398 79 ntBASIC-1.02□□□□□ -2.57
SDC4P31431 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.02□□□□□ -2.57
SDC4P31431 RNU6-874P-201ENST00000362390 105 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU4-73P-201ENST00000363164 141 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-961P-201ENST00000363893 105 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU4-75P-201ENST00000364621 146 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 SNORA72.3-201ENST00000365074 132 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 MIR548O-201ENST00000408583 114 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-938P-201ENST00000411285 103 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 USP9YP30-201ENST00000430729 455 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU7-87P-201ENST00000459343 62 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 AC010655.3-201ENST00000478818 450 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-408P-201ENST00000515910 100 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 SNORA25.13-201ENST00000516395 103 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 AC019193.3-201ENST00000609144 554 ntBASIC-1.03□□□□□ -2.57
SDC4P31431 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.04□□□□□ -2.58
SDC4P31431 RNU6-306P-201ENST00000384617 107 ntBASIC-1.04□□□□□ -2.58
SDC4P31431 RNA5SP484-201ENST00000458857 111 ntBASIC-1.04□□□□□ -2.58
SDC4P31431 MTND3P7-201ENST00000474435 343 ntBASIC-1.04□□□□□ -2.58
SDC4P31431 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.04□□□□□ -2.58
SDC4P31431 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.04□□□□□ -2.58
SDC4P31431 AC073869.9-201ENST00000641610 120 ntBASIC-1.04□□□□□ -2.58
SDC4P31431 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 RNU6-522P-201ENST00000364497 107 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 RNU6-865P-201ENST00000364772 107 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 MIR224-201ENST00000384889 81 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 MTND3P16-201ENST00000452205 344 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 RNU6-436P-201ENST00000516171 114 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 RNU7-53P-201ENST00000516705 60 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 AP003072.1-201ENST00000531740 145 ntBASIC-1.05□□□□□ -2.58
SDC4P31431 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.05□□□□□ -2.58
SDC4P31431 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU6-702P-201ENST00000364982 107 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU6-128P-201ENST00000383976 107 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNA5SP237-201ENST00000410414 113 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RPL30P15-201ENST00000457129 321 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU7-45P-201ENST00000459460 63 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU6-758P-201ENST00000516292 89 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU7-188P-201ENST00000517063 64 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 AC060788.1-201ENST00000521318 469 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.06□□□□□ -2.58
SDC4P31431 MIR5188-201ENST00000583467 113 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 AC060780.3-201ENST00000589464 80 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 AC124303.1-201ENST00000605703 360 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 AC018645.2-201ENST00000609151 472 ntBASIC-1.06□□□□□ -2.58
SDC4P31431 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 RNU6-455P-201ENST00000384681 107 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 SNORD41.1-201ENST00000391000 69 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 MIR190B-201ENST00000401119 79 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 MTCO2P19-201ENST00000427513 598 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 AL445193.1-201ENST00000441183 141 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 RPS29P24-201ENST00000486345 171 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 AC141846.1-201ENST00000568348 142 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 MIR4273-201ENST00000582824 84 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 AC093726.3-201ENST00000637588 150 ntBASIC-1.07□□□□□ -2.58
SDC4P31431 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms