Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-1209P-201ENST00000363655 107 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 RNU6-1020P-201ENST00000363684 107 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 Y_RNA.796-201ENST00000364268 102 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 Y_RNA.229-201ENST00000364347 113 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 Y_RNA.799-201ENST00000364992 102 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 Y_RNA.793-201ENST00000411222 111 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 SNX2P2-201ENST00000424553 323 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.51□□□□□ -2.17
HOXC8P31273 Y_RNA.644-201ENST00000459006 113 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 HMGN1P7-201ENST00000491722 313 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.51□□□□□ -2.17
HOXC8P31273 Y_RNA.674-201ENST00000516362 113 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 AC022559.1-201ENST00000520905 205 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 AL358944.1-201ENST00000528537 144 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HOXC8P31273 Z83818.1-201ENST00000603584 150 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 MIR6504-201ENST00000613520 61 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 JPX_2.1-201ENST00000614161 69 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 AL591926.4-201ENST00000616895 298 ntBASIC1.51□□□□□ -2.17
HOXC8P31273 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
HOXC8P31273 RNU6-1123P-201ENST00000362347 106 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 RNA5SP259-201ENST00000365541 109 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 MT-TT-201ENST00000387460 66 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 SNORA12.1-201ENST00000390873 148 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 RNU6-918P-201ENST00000391219 106 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 RNU6-381P-201ENST00000391259 108 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.5□□□□□ -2.17
HOXC8P31273 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC8P31273 SNRPGP10-201ENST00000432323 225 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC8P31273 Z98949.2-201ENST00000440996 144 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 AL138752.1-201ENST00000452964 351 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 RNU6-453P-201ENST00000516819 85 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 SNORA81.3-201ENST00000517283 198 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 AL049861.1-201ENST00000603130 150 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 RNU2-4P-201ENST00000606190 192 ntBASIC1.5□□□□□ -2.17
HOXC8P31273 AP000648.3-201ENST00000623539 4507 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 Y_RNA.29-201ENST00000362570 113 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 AL034345.1-201ENST00000407768 123 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 SCARNA8-201ENST00000515924 131 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 RNU6-1007P-201ENST00000516586 107 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 AP002392.1-201ENST00000537692 208 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 AC015688.6-201ENST00000577737 104 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 MIR2681-201ENST00000581814 105 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HOXC8P31273 AL161722.3-201ENST00000605789 2983 ntBASIC1.49□□□□□ -2.17
HOXC8P31273 MIR302D-201ENST00000362275 68 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 Y_RNA.116-201ENST00000363292 103 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 RNU6-1031P-201ENST00000384773 107 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 OR9P1P-201ENST00000496431 281 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 RNA5SP102-201ENST00000516865 106 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 AC004792.1-201ENST00000614523 137 ntBASIC1.48□□□□□ -2.17
HOXC8P31273 Y_RNA.7-201ENST00000362352 102 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 Y_RNA.785-201ENST00000384290 109 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 Y_RNA.508-201ENST00000384502 114 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 RNU4-70P-201ENST00000384579 139 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 Y_RNA.571-201ENST00000384753 98 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 MIR194-1-201ENST00000384892 85 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 MIR522-201ENST00000385071 87 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 Y_RNA.587-201ENST00000391210 103 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 RNA5SP496-201ENST00000391240 109 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 RNA5SP482-201ENST00000391269 118 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 CALM2P4-201ENST00000430810 426 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 PGBD4P5-201ENST00000445958 426 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 SNORD11-201ENST00000459124 84 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 NDUFA4P2-201ENST00000489989 244 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC8P31273 RN7SKP164-201ENST00000516138 266 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 Y_RNA.700-201ENST00000516806 100 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXC8P31273 MIR5688-201ENST00000580619 83 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 SNORA28-201ENST00000606769 126 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 AL021707.8-201ENST00000609428 183 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 AC021506.2-201ENST00000612354 169 ntBASIC1.47□□□□□ -2.17
HOXC8P31273 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HOXC8P31273 Y_RNA.182-201ENST00000363880 111 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 Y_RNA.355-201ENST00000365462 98 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 MIR616-201ENST00000385293 97 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 RNU6-131P-201ENST00000391144 107 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 AL606845.1-201ENST00000404881 255 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 PIGPP3-201ENST00000425307 415 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 RNU7-28P-201ENST00000516759 62 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 RNU6-182P-201ENST00000516970 105 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 RNU6-1116P-201ENST00000517269 99 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXC8P31273 MIR7111-201ENST00000619751 72 ntBASIC1.46□□□□□ -2.18
HOXC8P31273 Y_RNA.233-201ENST00000364407 101 ntBASIC1.45□□□□□ -2.18
HOXC8P31273 MT-TR-201ENST00000387439 65 ntBASIC1.45□□□□□ -2.18
HOXC8P31273 U8.16-201ENST00000391279 133 ntBASIC1.45□□□□□ -2.18
HOXC8P31273 Y_RNA.622-201ENST00000411091 108 ntBASIC1.45□□□□□ -2.18
HOXC8P31273 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXC8P31273 AC023449.1-201ENST00000454464 154 ntBASIC1.45□□□□□ -2.18
HOXC8P31273 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms