Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 RNU2-60P-201ENST00000517290 128 ntBASIC2.14□□□□□ -2.07
SDHAP31040 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.14□□□□□ -2.07
SDHAP31040 MIR5197-201ENST00000583721 112 ntBASIC2.14□□□□□ -2.07
SDHAP31040 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
SDHAP31040 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
SDHAP31040 RNU6-235P-201ENST00000362644 107 ntBASIC2.13□□□□□ -2.07
SDHAP31040 RNU6-309P-201ENST00000364573 106 ntBASIC2.13□□□□□ -2.07
SDHAP31040 Y_RNA.261-201ENST00000364631 102 ntBASIC2.13□□□□□ -2.07
SDHAP31040 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
SDHAP31040 Y_RNA.510-201ENST00000384511 114 ntBASIC2.13□□□□□ -2.07
SDHAP31040 SNORA22C-201ENST00000384614 134 ntBASIC2.13□□□□□ -2.07
SDHAP31040 MIR516B2-201ENST00000385190 85 ntBASIC2.13□□□□□ -2.07
SDHAP31040 MIR660-201ENST00000385235 97 ntBASIC2.13□□□□□ -2.07
SDHAP31040 AC087499.4-201ENST00000448505 178 ntBASIC2.13□□□□□ -2.07
SDHAP31040 AC099513.1-201ENST00000490423 301 ntBASIC2.13□□□□□ -2.07
SDHAP31040 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.13□□□□□ -2.07
SDHAP31040 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
SDHAP31040 AL022345.2-201ENST00000606307 135 ntBASIC2.13□□□□□ -2.07
SDHAP31040 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.13□□□□□ -2.07
SDHAP31040 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SDHAP31040 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SDHAP31040 RNU6-508P-201ENST00000363231 103 ntBASIC2.12□□□□□ -2.07
SDHAP31040 AC108938.1-201ENST00000451204 136 ntBASIC2.12□□□□□ -2.07
SDHAP31040 SNORD36C-201ENST00000516733 66 ntBASIC2.12□□□□□ -2.07
SDHAP31040 AP003484.1-201ENST00000530974 250 ntBASIC2.12□□□□□ -2.07
SDHAP31040 MIR3121-201ENST00000579680 77 ntBASIC2.12□□□□□ -2.07
SDHAP31040 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.12□□□□□ -2.07
SDHAP31040 AC103810.6-201ENST00000606708 136 ntBASIC2.12□□□□□ -2.07
SDHAP31040 MIR6817-201ENST00000615588 66 ntBASIC2.12□□□□□ -2.07
SDHAP31040 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
SDHAP31040 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.12□□□□□ -2.07
SDHAP31040 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SDHAP31040 Y_RNA.114-201ENST00000363265 113 ntBASIC2.11□□□□□ -2.07
SDHAP31040 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
SDHAP31040 MIR136-201ENST00000385207 82 ntBASIC2.11□□□□□ -2.07
SDHAP31040 RNA5SP212-201ENST00000391223 107 ntBASIC2.11□□□□□ -2.07
SDHAP31040 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
SDHAP31040 RPL23AP94-201ENST00000512518 302 ntBASIC2.11□□□□□ -2.07
SDHAP31040 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
SDHAP31040 AC090049.2-201ENST00000550377 109 ntBASIC2.11□□□□□ -2.07
SDHAP31040 AL359881.1-201ENST00000602916 267 ntBASIC2.11□□□□□ -2.07
SDHAP31040 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.11□□□□□ -2.07
SDHAP31040 MIR376A2-201ENST00000636782 80 ntBASIC2.11□□□□□ -2.07
SDHAP31040 MIR424-201ENST00000362227 98 ntBASIC2.1□□□□□ -2.07
SDHAP31040 Y_RNA.241-201ENST00000364470 117 ntBASIC2.1□□□□□ -2.07
SDHAP31040 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.1□□□□□ -2.07
SDHAP31040 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.1□□□□□ -2.07
SDHAP31040 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.1□□□□□ -2.07
SDHAP31040 RNA5SP148-201ENST00000516527 94 ntBASIC2.1□□□□□ -2.07
SDHAP31040 AC133485.4-201ENST00000561835 220 ntBASIC2.1□□□□□ -2.07
SDHAP31040 AC138907.4-201ENST00000570107 226 ntBASIC2.1□□□□□ -2.07
SDHAP31040 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.1□□□□□ -2.07
SDHAP31040 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
SDHAP31040 RNU6-647P-201ENST00000364243 107 ntBASIC2.09□□□□□ -2.07
SDHAP31040 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
SDHAP31040 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.09□□□□□ -2.07
SDHAP31040 RNU7-107P-201ENST00000459121 61 ntBASIC2.09□□□□□ -2.07
SDHAP31040 AC234781.5-201ENST00000508429 271 ntBASIC2.09□□□□□ -2.07
SDHAP31040 RN7SKP179-201ENST00000516126 217 ntBASIC2.09□□□□□ -2.07
SDHAP31040 SCARNA15-202ENST00000516881 127 ntBASIC2.09□□□□□ -2.07
SDHAP31040 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.09□□□□□ -2.07
SDHAP31040 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.08
SDHAP31040 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
SDHAP31040 MIR342-201ENST00000362212 99 ntBASIC2.08□□□□□ -2.08
SDHAP31040 U8.17-201ENST00000391292 132 ntBASIC2.08□□□□□ -2.08
SDHAP31040 MIR1267-201ENST00000408723 78 ntBASIC2.08□□□□□ -2.08
SDHAP31040 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.08□□□□□ -2.08
SDHAP31040 AL158147.1-201ENST00000443970 75 ntBASIC2.08□□□□□ -2.08
SDHAP31040 RNA5SP236-201ENST00000516169 116 ntBASIC2.08□□□□□ -2.08
SDHAP31040 RNU6-830P-201ENST00000516353 107 ntBASIC2.08□□□□□ -2.08
SDHAP31040 RNU6-1061P-201ENST00000516530 99 ntBASIC2.08□□□□□ -2.08
SDHAP31040 RNU7-181P-201ENST00000517234 74 ntBASIC2.08□□□□□ -2.08
SDHAP31040 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
SDHAP31040 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
SDHAP31040 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.08□□□□□ -2.08
SDHAP31040 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SDHAP31040 AC008555.8-201ENST00000623602 2168 ntBASIC2.08□□□□□ -2.08
SDHAP31040 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
SDHAP31040 RNU6-1123P-201ENST00000362347 106 ntBASIC2.07□□□□□ -2.08
SDHAP31040 RNU6-1290P-201ENST00000362957 109 ntBASIC2.07□□□□□ -2.08
SDHAP31040 Y_RNA.351-201ENST00000365436 96 ntBASIC2.07□□□□□ -2.08
SDHAP31040 Y_RNA.440-201ENST00000384120 114 ntBASIC2.07□□□□□ -2.08
SDHAP31040 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
SDHAP31040 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
SDHAP31040 RNU6-938P-201ENST00000411285 103 ntBASIC2.07□□□□□ -2.08
SDHAP31040 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
SDHAP31040 SNX2P2-201ENST00000424553 323 ntBASIC2.07□□□□□ -2.08
SDHAP31040 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
SDHAP31040 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
SDHAP31040 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
SDHAP31040 SUMO2P16-201ENST00000519475 264 ntBASIC2.07□□□□□ -2.08
SDHAP31040 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.07□□□□□ -2.08
SDHAP31040 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
SDHAP31040 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
SDHAP31040 AC106754.2-201ENST00000623006 233 ntBASIC2.07□□□□□ -2.08
SDHAP31040 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SDHAP31040 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.06□□□□□ -2.08
SDHAP31040 RNA5SP205-201ENST00000364653 136 ntBASIC2.06□□□□□ -2.08
SDHAP31040 RNU1-133P-201ENST00000364867 167 ntBASIC2.06□□□□□ -2.08
SDHAP31040 RNU6-203P-201ENST00000384038 104 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms