Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 RNU6-911P-201ENST00000516523 104 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 AC022306.2-201ENST00000617563 647 ntBASIC0.12□□□□□ -2.39
SLC6A1P30531 Y_RNA.115-201ENST00000363272 98 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 Y_RNA.314-201ENST00000365114 102 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 Y_RNA.331-201ENST00000365267 102 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 SNORA40.8-201ENST00000411034 126 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 PDCL2P1-201ENST00000419302 352 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 SNORD11-201ENST00000459124 84 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 RNU6-437P-201ENST00000459408 95 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 SNORA25.12-201ENST00000516202 82 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 SNORA18.4-201ENST00000516440 124 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.11□□□□□ -2.39
SLC6A1P30531 AC022523.2-201ENST00000561045 150 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 RPL23AP91-201ENST00000569211 455 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 MIR3145-201ENST00000580727 82 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 AL109933.3-201ENST00000619095 188 ntBASIC0.11□□□□□ -2.39
SLC6A1P30531 RNA5SP62-201ENST00000363457 110 ntBASIC0.1□□□□□ -2.39
SLC6A1P30531 RNA5SP94-201ENST00000516917 108 ntBASIC0.1□□□□□ -2.39
SLC6A1P30531 AC008608.1-201ENST00000603910 127 ntBASIC0.1□□□□□ -2.39
SLC6A1P30531 SNORA25.18-201ENST00000607153 114 ntBASIC0.1□□□□□ -2.39
SLC6A1P30531 Y_RNA.6-201ENST00000362350 114 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 RNU6-845P-201ENST00000362578 103 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 Y_RNA.166-201ENST00000363730 102 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 RNU6-674P-201ENST00000363831 107 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 RNU6-1048P-201ENST00000364054 107 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 SNORA24-201ENST00000384096 131 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 MIR559-201ENST00000385188 96 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 MIR938-201ENST00000401216 83 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 SNORD100-201ENST00000408573 76 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 RNU2-14P-201ENST00000411053 191 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 SNORD71-201ENST00000411292 86 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 RNU7-25P-201ENST00000516544 62 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 MIR2681-201ENST00000581814 105 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 MIR5690-201ENST00000583739 73 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 AL080274.1-201ENST00000605565 220 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 MIR6740-201ENST00000618268 113 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 AC073869.6-201ENST00000640656 341 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 AC010332.2-201ENST00000613083 1904 ntBASIC0.09□□□□□ -2.4
SLC6A1P30531 RNU4-50P-201ENST00000364361 141 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 Y_RNA.279-201ENST00000364763 95 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 Y_RNA.494-201ENST00000384432 111 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 SNORA36B-201ENST00000410438 131 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 AC024067.1-201ENST00000426199 223 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 RNU7-141P-201ENST00000459304 62 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 snoU13.16-201ENST00000459350 104 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 AC090897.1-201ENST00000580909 226 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 AC005357.1-201ENST00000588399 301 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 AC134878.1-201ENST00000619901 243 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
SLC6A1P30531 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
SLC6A1P30531 Y_RNA.547-201ENST00000384654 119 ntBASIC0.07□□□□□ -2.4
SLC6A1P30531 MIR1197-201ENST00000408818 88 ntBASIC0.07□□□□□ -2.4
SLC6A1P30531 RNU6-863P-201ENST00000515989 104 ntBASIC0.07□□□□□ -2.4
SLC6A1P30531 AC006600.1-201ENST00000572529 153 ntBASIC0.07□□□□□ -2.4
SLC6A1P30531 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.07□□□□□ -2.4
SLC6A1P30531 VN1R91P-201ENST00000594377 169 ntBASIC0.07□□□□□ -2.4
SLC6A1P30531 AC010205.1-201ENST00000616668 449 ntBASIC0.07□□□□□ -2.4
SLC6A1P30531 SNORD118-201ENST00000363593 134 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 SNORD81.2-201ENST00000365153 76 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 Y_RNA.462-201ENST00000384268 102 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 SNORA8.2-201ENST00000384372 139 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 MIR548O-201ENST00000408583 114 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.06□□□□□ -2.4
SLC6A1P30531 AC236972.2-201ENST00000434979 310 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 AC099799.1-201ENST00000439809 192 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 RNU7-102P-201ENST00000458948 62 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 Y_RNA.653-201ENST00000459091 95 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 AC010655.3-201ENST00000478818 450 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 RNU7-110P-201ENST00000516891 62 ntBASIC0.06□□□□□ -2.4
SLC6A1P30531 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.06□□□□□ -2.4
SLC6A1P30531 RNU6-490P-201ENST00000362985 107 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 Y_RNA.160-201ENST00000363677 92 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 RNA5SP325-201ENST00000363756 130 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 RNU6-801P-201ENST00000364087 105 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 SNORA63C-201ENST00000364578 129 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 RNU6-815P-201ENST00000384080 113 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 SNORA72.4-201ENST00000384174 132 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 Y_RNA.474-201ENST00000384341 102 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 MIR125B2-201ENST00000385128 89 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 RNU4-30P-201ENST00000410245 143 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 MIR18B-201ENST00000454574 71 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 RNU6-699P-201ENST00000517081 110 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 AL355297.3-201ENST00000604082 446 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 AC011373.1-201ENST00000607270 237 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 MIR4272-201ENST00000635924 64 ntBASIC0.05□□□□□ -2.4
SLC6A1P30531 SNORD115-34-201ENST00000362441 82 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-12-201ENST00000362583 82 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-29-201ENST00000362834 82 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-9-201ENST00000362912 82 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-21-201ENST00000362963 81 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-14-201ENST00000363090 81 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-13-201ENST00000363358 82 ntBASIC0.04□□□□□ -2.4
SLC6A1P30531 SNORD115-41-201ENST00000363608 82 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms