Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 Y_RNA.47-201ENST00000362697 108 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 MT-TW-201ENST00000387382 68 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCD3P28288 SNORD2.1-201ENST00000458762 69 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 RNU6-327P-201ENST00000516270 127 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 RNU7-149P-201ENST00000516739 59 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 AL359821.1-201ENST00000605519 182 ntBASIC1.27□□□□□ -2.21
ABCD3P28288 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCD3P28288 RNU6-740P-201ENST00000364734 105 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 RNU6-472P-201ENST00000384299 107 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 Y_RNA.556-201ENST00000384677 113 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCD3P28288 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 TRMT112P2-201ENST00000512910 132 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 SNORD116-28-201ENST00000516123 91 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 SNORD77.4-201ENST00000516158 81 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 Y_RNA.673-201ENST00000516306 88 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 MIR3192-201ENST00000584920 77 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 AL049861.1-201ENST00000603130 150 ntBASIC1.26□□□□□ -2.21
ABCD3P28288 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.26□□□□□ -2.21
ABCD3P28288 Y_RNA.117-201ENST00000363294 101 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 RNU6-1309P-201ENST00000363305 108 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 Y_RNA.162-201ENST00000363683 102 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 Y_RNA.226-201ENST00000364337 114 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 SNORA1.2-201ENST00000365189 134 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 Y_RNA.352-201ENST00000365439 102 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 Y_RNA.370-201ENST00000365589 108 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 MIR1302-3-201ENST00000408128 138 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 Y_RNA.590-201ENST00000410140 107 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 RNU6-321P-201ENST00000410912 106 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 COX6CP14-201ENST00000469580 174 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
ABCD3P28288 MTCO2P24-201ENST00000515611 426 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 RN7SKP164-201ENST00000516138 266 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 RNU6-1045P-201ENST00000516321 107 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 AC015726.2-201ENST00000620112 122 ntBASIC1.25□□□□□ -2.21
ABCD3P28288 AC068700.1-201ENST00000565862 3754 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 MIR626-201ENST00000385032 94 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 MIR1287-201ENST00000408492 90 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 MTND2P23-201ENST00000422990 651 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 Y_RNA.679-201ENST00000516416 91 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 AC100767.1-201ENST00000528178 123 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 PRELID3BP2-201ENST00000605362 201 ntBASIC1.24□□□□□ -2.21
ABCD3P28288 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 Y_RNA.288-201ENST00000364854 92 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 U8.17-201ENST00000391292 132 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
ABCD3P28288 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 SCARNA15.1-201ENST00000516384 125 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.23□□□□□ -2.21
ABCD3P28288 MIR4282-201ENST00000583613 67 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 AC008133.2-201ENST00000624540 351 ntBASIC1.23□□□□□ -2.21
ABCD3P28288 Y_RNA.24-201ENST00000362508 103 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 RNA5SP264-201ENST00000363115 107 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 Y_RNA.363-201ENST00000365529 113 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 Y_RNA.396-201ENST00000383949 103 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 MIR548H3-201ENST00000408771 118 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.22□□□□□ -2.21
ABCD3P28288 AC063976.4-201ENST00000421971 163 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 MTCYBP9-201ENST00000431021 303 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCD3P28288 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 RNU7-41P-201ENST00000515917 61 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.22□□□□□ -2.21
ABCD3P28288 MIR548AR-201ENST00000582191 57 ntBASIC1.22□□□□□ -2.21
ABCD3P28288 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
ABCD3P28288 Y_RNA.229-201ENST00000364347 113 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 RNY3P5-201ENST00000384127 102 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 Y_RNA.587-201ENST00000391210 103 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 MIR548O-201ENST00000408583 114 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.21□□□□□ -2.22
ABCD3P28288 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.21□□□□□ -2.22
ABCD3P28288 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 RPS23P4-201ENST00000487908 423 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.21□□□□□ -2.22
ABCD3P28288 SCARNA8-201ENST00000515924 131 ntBASIC1.21□□□□□ -2.22
ABCD3P28288 MIR103A2-201ENST00000362154 78 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 Y_RNA.133-201ENST00000363428 110 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 RNU4-10P-201ENST00000364383 140 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 Y_RNA.304-201ENST00000365011 112 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 SNORA25.9-201ENST00000365087 128 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 SNORA26-201ENST00000391286 122 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 AL078595.1-201ENST00000404458 226 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms