Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SNORD115-16-201ENST00000363887 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-6-201ENST00000363942 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-42-201ENST00000364273 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-15-201ENST00000364809 81 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-1-201ENST00000364961 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-26-201ENST00000365067 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-10-201ENST00000365073 81 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-43-201ENST00000365503 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-36-201ENST00000365629 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 RNU6-780P-201ENST00000391030 104 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORA75.4-201ENST00000391278 119 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 MIR1265-201ENST00000408444 86 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 RNU6-710P-201ENST00000410424 105 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 AC074085.1-201ENST00000413598 418 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.4□□□□□ -2.47
HLA-DMBP28068 POLR2KP2-201ENST00000438155 177 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SUMO1P3-201ENST00000439961 304 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD4A-201ENST00000459174 72 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 RNU6-566P-201ENST00000516790 107 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 AC127455.1-201ENST00000565496 145 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 AC018462.2-201ENST00000605375 395 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-40-201ENST00000606510 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 MIR3662-201ENST00000637030 95 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORA18.1-201ENST00000363418 128 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RNU4-75P-201ENST00000364621 146 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RNU6-259P-201ENST00000383999 107 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RNU6-913P-201ENST00000390913 95 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 FCF1P9-201ENST00000412546 282 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RNU7-67P-201ENST00000459003 62 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RPL39P34-201ENST00000477141 156 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 AC026782.1-201ENST00000512952 449 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RNU6-155P-201ENST00000516347 100 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 RNU6-966P-201ENST00000516479 104 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 AC024405.2-202ENST00000532731 184 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 MIR499B-201ENST00000636498 73 ntBASIC-0.41□□□□□ -2.48
HLA-DMBP28068 MIR101-1-201ENST00000362265 75 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 RNU6-740P-201ENST00000364734 105 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.42□□□□□ -2.48
HLA-DMBP28068 AC010424.1-201ENST00000506336 297 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 PRDX4P1-201ENST00000507189 574 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 RNU6-320P-201ENST00000516511 106 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 MTND3P12-201ENST00000559068 328 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 AC006362.1-201ENST00000567392 174 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 MIR3152-201ENST00000579801 74 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 MIR2681-201ENST00000581814 105 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 RNU1-29P-201ENST00000606574 126 ntBASIC-0.42□□□□□ -2.48
HLA-DMBP28068 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 RNU4-73P-201ENST00000363164 141 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 RNU6-602P-201ENST00000411155 105 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.43□□□□□ -2.48
HLA-DMBP28068 RNU7-115P-201ENST00000516433 55 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 RNU6-273P-201ENST00000516937 96 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.43□□□□□ -2.48
HLA-DMBP28068 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.43□□□□□ -2.48
HLA-DMBP28068 AC090617.10-201ENST00000624308 134 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 MIR6086-201ENST00000638065 55 ntBASIC-0.43□□□□□ -2.48
HLA-DMBP28068 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU6-831P-201ENST00000384548 107 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 SNORD28-201ENST00000384706 75 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 AL022718.1-201ENST00000412004 84 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 MTND2P9-201ENST00000422293 931 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 MTND4P28-201ENST00000426217 387 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 FCF1P4-201ENST00000448326 183 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 SNORD11-201ENST00000459124 84 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU7-25P-201ENST00000516544 62 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU6-504P-201ENST00000516568 104 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 RNU6-958P-201ENST00000516995 106 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 AC131281.1-201ENST00000522984 164 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 AP000942.4-201ENST00000604811 241 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 MIR8064-201ENST00000612863 90 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.44□□□□□ -2.48
HLA-DMBP28068 AC090582.1-201ENST00000636321 199 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 MIR1321-201ENST00000637766 79 ntBASIC-0.44□□□□□ -2.48
HLA-DMBP28068 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-674P-201ENST00000363831 107 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-652P-201ENST00000365488 107 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-20P-201ENST00000384106 107 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU4-83P-201ENST00000410863 133 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-373P-201ENST00000411247 98 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-758P-201ENST00000516292 89 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 SNORA31.14-201ENST00000516728 116 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms