Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR4724-201ENST00000579485 89 ntBASIC1.21□□□□□ -2.22
CDH3P22223 MIR4282-201ENST00000583613 67 ntBASIC1.21□□□□□ -2.22
CDH3P22223 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
CDH3P22223 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
CDH3P22223 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
CDH3P22223 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
CDH3P22223 SNORD14E-201ENST00000364009 85 ntBASIC1.2□□□□□ -2.22
CDH3P22223 Y_RNA.288-201ENST00000364854 92 ntBASIC1.2□□□□□ -2.22
CDH3P22223 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
CDH3P22223 Y_RNA.352-201ENST00000365439 102 ntBASIC1.2□□□□□ -2.22
CDH3P22223 Y_RNA.562-201ENST00000384695 113 ntBASIC1.2□□□□□ -2.22
CDH3P22223 Y_RNA.572-201ENST00000384757 98 ntBASIC1.2□□□□□ -2.22
CDH3P22223 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.2□□□□□ -2.22
CDH3P22223 AC245047.8-201ENST00000456455 284 ntBASIC1.2□□□□□ -2.22
CDH3P22223 AC100767.1-201ENST00000528178 123 ntBASIC1.2□□□□□ -2.22
CDH3P22223 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH3P22223 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH3P22223 Y_RNA.802-201ENST00000614892 130 ntBASIC1.2□□□□□ -2.22
CDH3P22223 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH3P22223 Y_RNA.14-201ENST00000362415 103 ntBASIC1.19□□□□□ -2.22
CDH3P22223 Y_RNA.122-201ENST00000363331 96 ntBASIC1.19□□□□□ -2.22
CDH3P22223 Y_RNA.238-201ENST00000364441 102 ntBASIC1.19□□□□□ -2.22
CDH3P22223 MIR136-201ENST00000385207 82 ntBASIC1.19□□□□□ -2.22
CDH3P22223 RNA5SP496-201ENST00000391240 109 ntBASIC1.19□□□□□ -2.22
CDH3P22223 MIR1302-3-201ENST00000408128 138 ntBASIC1.19□□□□□ -2.22
CDH3P22223 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.19□□□□□ -2.22
CDH3P22223 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH3P22223 AL049861.1-201ENST00000603130 150 ntBASIC1.19□□□□□ -2.22
CDH3P22223 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDH3P22223 RNU6-268P-201ENST00000364174 107 ntBASIC1.18□□□□□ -2.22
CDH3P22223 Y_RNA.277-201ENST00000364754 102 ntBASIC1.18□□□□□ -2.22
CDH3P22223 RNU6-442P-201ENST00000383968 104 ntBASIC1.18□□□□□ -2.22
CDH3P22223 Y_RNA.556-201ENST00000384677 113 ntBASIC1.18□□□□□ -2.22
CDH3P22223 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
CDH3P22223 Y_RNA.590-201ENST00000410140 107 ntBASIC1.18□□□□□ -2.22
CDH3P22223 RNU6-1132P-201ENST00000459214 107 ntBASIC1.18□□□□□ -2.22
CDH3P22223 MTND1P19-201ENST00000511780 315 ntBASIC1.18□□□□□ -2.22
CDH3P22223 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
CDH3P22223 MIR5688-201ENST00000580619 83 ntBASIC1.18□□□□□ -2.22
CDH3P22223 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
CDH3P22223 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.18□□□□□ -2.22
CDH3P22223 uc_338.4-201ENST00000616635 176 ntBASIC1.18□□□□□ -2.22
CDH3P22223 Y_RNA.24-201ENST00000362508 103 ntBASIC1.17□□□□□ -2.22
CDH3P22223 SNORA8.3-201ENST00000384679 139 ntBASIC1.17□□□□□ -2.22
CDH3P22223 MIR626-201ENST00000385032 94 ntBASIC1.17□□□□□ -2.22
CDH3P22223 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
CDH3P22223 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
CDH3P22223 SNORD111.1-201ENST00000516421 86 ntBASIC1.17□□□□□ -2.22
CDH3P22223 MIR4503-201ENST00000582187 83 ntBASIC1.17□□□□□ -2.22
CDH3P22223 AC006006.1-201ENST00000603082 144 ntBASIC1.17□□□□□ -2.22
CDH3P22223 AL096861.1-201ENST00000610899 123 ntBASIC1.17□□□□□ -2.22
CDH3P22223 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
CDH3P22223 Y_RNA.54-201ENST00000362766 105 ntBASIC1.16□□□□□ -2.22
CDH3P22223 Y_RNA.76-201ENST00000362931 109 ntBASIC1.16□□□□□ -2.22
CDH3P22223 Y_RNA.229-201ENST00000364347 113 ntBASIC1.16□□□□□ -2.22
CDH3P22223 RNU6-574P-201ENST00000384265 107 ntBASIC1.16□□□□□ -2.22
CDH3P22223 MIR802-201ENST00000390235 94 ntBASIC1.16□□□□□ -2.22
CDH3P22223 MIR548H3-201ENST00000408771 118 ntBASIC1.16□□□□□ -2.22
CDH3P22223 snoU13.25-201ENST00000458945 104 ntBASIC1.16□□□□□ -2.22
CDH3P22223 SNORD77.4-201ENST00000516158 81 ntBASIC1.16□□□□□ -2.22
CDH3P22223 Y_RNA.679-201ENST00000516416 91 ntBASIC1.16□□□□□ -2.22
CDH3P22223 RNU6-1007P-201ENST00000516586 107 ntBASIC1.16□□□□□ -2.22
CDH3P22223 RNU7-149P-201ENST00000516739 59 ntBASIC1.16□□□□□ -2.22
CDH3P22223 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
CDH3P22223 SNORA74.3-201ENST00000517108 154 ntBASIC1.16□□□□□ -2.22
CDH3P22223 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
CDH3P22223 AC011921.3-201ENST00000605540 361 ntBASIC1.16□□□□□ -2.22
CDH3P22223 AC006441.5-201ENST00000612680 209 ntBASIC1.16□□□□□ -2.22
CDH3P22223 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
CDH3P22223 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH3P22223 Y_RNA.304-201ENST00000365011 112 ntBASIC1.15□□□□□ -2.23
CDH3P22223 SNORA25.9-201ENST00000365087 128 ntBASIC1.15□□□□□ -2.23
CDH3P22223 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
CDH3P22223 RNU6-196P-201ENST00000384315 107 ntBASIC1.15□□□□□ -2.23
CDH3P22223 MIR499A-201ENST00000384903 122 ntBASIC1.15□□□□□ -2.23
CDH3P22223 MIR15B-201ENST00000385045 98 ntBASIC1.15□□□□□ -2.23
CDH3P22223 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH3P22223 SNORD123-201ENST00000459473 70 ntBASIC1.15□□□□□ -2.23
CDH3P22223 SNORD116-28-201ENST00000516123 91 ntBASIC1.15□□□□□ -2.23
CDH3P22223 RNU6-947P-201ENST00000516264 106 ntBASIC1.15□□□□□ -2.23
CDH3P22223 MIR3192-201ENST00000584920 77 ntBASIC1.15□□□□□ -2.23
CDH3P22223 AL162730.1-201ENST00000605734 292 ntBASIC1.15□□□□□ -2.23
CDH3P22223 U4.1-201ENST00000620349 87 ntBASIC1.15□□□□□ -2.23
CDH3P22223 AL365265.1-201ENST00000621045 234 ntBASIC1.15□□□□□ -2.23
CDH3P22223 RNU6-653P-201ENST00000363074 106 ntBASIC1.14□□□□□ -2.23
CDH3P22223 Y_RNA.193-201ENST00000363979 102 ntBASIC1.14□□□□□ -2.23
CDH3P22223 snoU2_19.4-201ENST00000364329 80 ntBASIC1.14□□□□□ -2.23
CDH3P22223 RNU6-1138P-201ENST00000365359 106 ntBASIC1.14□□□□□ -2.23
CDH3P22223 Y_RNA.416-201ENST00000384014 113 ntBASIC1.14□□□□□ -2.23
CDH3P22223 SNORD38C-201ENST00000384381 69 ntBASIC1.14□□□□□ -2.23
CDH3P22223 RNU6-1054P-201ENST00000411293 104 ntBASIC1.14□□□□□ -2.23
CDH3P22223 AC023449.1-201ENST00000454464 154 ntBASIC1.14□□□□□ -2.23
CDH3P22223 AC048334.1-201ENST00000477975 159 ntBASIC1.14□□□□□ -2.23
CDH3P22223 SNORA31.2-201ENST00000516019 134 ntBASIC1.14□□□□□ -2.23
CDH3P22223 RN7SKP164-201ENST00000516138 266 ntBASIC1.14□□□□□ -2.23
CDH3P22223 RNU6-830P-201ENST00000516353 107 ntBASIC1.14□□□□□ -2.23
CDH3P22223 Y_RNA.680-201ENST00000516441 93 ntBASIC1.14□□□□□ -2.23
CDH3P22223 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH3P22223 AC062037.2-201ENST00000610137 73 ntBASIC1.14□□□□□ -2.23
CDH3P22223 AL442067.1-201ENST00000613261 223 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 293.6 ms