Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPL30P16-201ENST00000419341 429 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 SNORD54-201ENST00000459159 67 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 RPS29P24-201ENST00000486345 171 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 AC108019.1-201ENST00000512540 175 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 AC008507.2-201ENST00000588402 1176 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 MIR664B-201ENST00000626756 61 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 RNU6-462P-201ENST00000362659 105 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 Y_RNA.446-201ENST00000384178 104 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 RNU6-1127P-201ENST00000384580 107 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 MIR487B-201ENST00000385021 84 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 RNU6-1106P-201ENST00000390845 107 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.18□□□□□ -2.76
HMGA1P17096 RNA5SP237-201ENST00000410414 113 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 RNU6-325P-201ENST00000411132 105 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.18□□□□□ -2.76
HMGA1P17096 RNU6-980P-201ENST00000516925 103 ntBASIC-2.18□□□□□ -2.76
HMGA1P17096 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 RNU6-792P-201ENST00000363490 107 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 MIR626-201ENST00000385032 94 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 RNU2-51P-201ENST00000410708 197 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-2.19□□□□□ -2.76
HMGA1P17096 U8.19-201ENST00000459095 133 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 U8.22-201ENST00000459141 133 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-2.19□□□□□ -2.76
HMGA1P17096 AC245297.2-201ENST00000610119 565 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 AP001282.2-201ENST00000616149 309 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 AC009159.2-201ENST00000617603 606 ntBASIC-2.19□□□□□ -2.76
HMGA1P17096 RNA5SP403-201ENST00000363598 108 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 RNU6-268P-201ENST00000364174 107 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 RNU6-442P-201ENST00000383968 104 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 MTND1P12-201ENST00000455231 147 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 AC005972.2-201ENST00000604690 348 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 AC018714.1-201ENST00000605028 208 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 MIR8055-201ENST00000610739 97 ntBASIC-2.2□□□□□ -2.76
HMGA1P17096 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-2.2□□□□□ -2.76
HMGA1P17096 Y_RNA.221-201ENST00000364248 96 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 RNU6-588P-201ENST00000410281 105 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 RNU2-29P-201ENST00000410423 189 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 RNU6-1190P-201ENST00000410811 104 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 AC096949.1-201ENST00000412047 152 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 SNORD18.2-201ENST00000459604 70 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 MTCO3P42-201ENST00000509488 518 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 MTCO3P39-201ENST00000514812 518 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 RNU6-1102P-201ENST00000516149 96 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 AL442663.2-201ENST00000554385 511 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 YWHAEP2-201ENST00000580066 112 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 AC026741.1-201ENST00000605892 482 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 AC093783.1-201ENST00000612976 329 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 AL662814.1-201ENST00000617364 121 ntBASIC-2.21□□□□□ -2.76
HMGA1P17096 RNU6-179P-201ENST00000363350 107 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 AL603914.1-201ENST00000401964 204 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 MTCYBP36-201ENST00000404146 440 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 SNRPGP14-201ENST00000435400 219 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 AL353813.1-201ENST00000440700 253 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 RNU6-410P-201ENST00000517006 107 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 SNORA25.17-201ENST00000517184 124 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 MIR4756-201ENST00000577874 78 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-2.22□□□□□ -2.76
HMGA1P17096 MIR6874-201ENST00000635894 71 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 AC099654.12-201ENST00000639868 649 ntBASIC-2.22□□□□□ -2.76
HMGA1P17096 SNORD115-12-201ENST00000362583 82 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORD115-9-201ENST00000362912 82 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORD115-19-201ENST00000363098 82 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORD115-18-201ENST00000363293 82 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 Y_RNA.172-201ENST00000363765 102 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 RNU6-266P-201ENST00000364225 107 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORD115-17-201ENST00000364612 82 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORD115-20-201ENST00000365099 82 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORA20.2-201ENST00000383922 131 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORD73A-201ENST00000386062 65 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 MTND1P27-201ENST00000451117 902 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 RNU6-1198P-201ENST00000516904 67 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 SNORA40.17-201ENST00000517256 115 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 AC060788.1-201ENST00000521318 469 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 AC022616.4-201ENST00000522985 181 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 ZNF92P2-201ENST00000600543 1059 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 MIR6854-201ENST00000614935 69 ntBASIC-2.23□□□□□ -2.77
HMGA1P17096 RNU6-973P-201ENST00000364690 107 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 RNU6-550P-201ENST00000391057 101 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 RNU6-466P-201ENST00000391224 103 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-2.24□□□□□ -2.77
HMGA1P17096 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.24□□□□□ -2.77
HMGA1P17096 RNU6-531P-201ENST00000516694 104 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 MIR3118-1-201ENST00000581787 76 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 AC109347.2-201ENST00000610220 349 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 AC097460.3-201ENST00000623099 442 ntBASIC-2.24□□□□□ -2.77
HMGA1P17096 RNU5F-3P-201ENST00000363767 117 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 SNORD115-8-201ENST00000363856 82 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 RNY4P7-201ENST00000364600 96 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 RNU1-141P-201ENST00000364623 158 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 SNORD115-38-201ENST00000365037 82 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 AC137499.1-201ENST00000427602 88 ntBASIC-2.25□□□□□ -2.77
HMGA1P17096 AL158053.1-201ENST00000441503 453 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms