Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC009961.2-201ENST00000435771 251 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 SCARNA18B-201ENST00000458806 135 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 AP002963.1-201ENST00000530590 184 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 MIR5692C1-201ENST00000585309 91 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 AL121757.2-201ENST00000611223 313 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 RNU6-82P-201ENST00000363970 107 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 RNU6-597P-201ENST00000365620 102 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 RNU6-636P-201ENST00000384598 107 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 SNORD72-201ENST00000390994 80 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 AL603910.2-201ENST00000407268 136 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 SNORD22.1-201ENST00000516331 125 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 AL357078.3-201ENST00000607528 618 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 JPX_2.1-201ENST00000614161 69 ntBASIC-1.55□□□□□ -2.66
HIST1H1DP16402 RNU6-509P-201ENST00000363519 107 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNY4P34-201ENST00000364779 95 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNY3P5-201ENST00000384127 102 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNU6-83P-201ENST00000384568 112 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 MIR518B-201ENST00000385127 83 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RN7SKP19-201ENST00000516016 252 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.56□□□□□ -2.66
HIST1H1DP16402 AP000676.1-201ENST00000533307 52 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 MIR4999-201ENST00000585029 91 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 AC018462.2-201ENST00000605375 395 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 AC009161.2-201ENST00000624626 138 ntBASIC-1.56□□□□□ -2.66
HIST1H1DP16402 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 RNU6-431P-201ENST00000383874 107 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 RNU6-24P-201ENST00000384440 107 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 SNORD64-201ENST00000386683 67 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 USP9YP16-201ENST00000430287 407 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 USP9YP23-201ENST00000455085 407 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 snoU13.13-201ENST00000458842 104 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 AC022137.1-201ENST00000483735 151 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 RNU7-175P-201ENST00000515915 61 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 RNU7-25P-201ENST00000516544 62 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 DEFB131E-201ENST00000532329 154 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 MIR4424-201ENST00000585257 86 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 POLR3GP2-201ENST00000588366 668 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 AC124312.5-201ENST00000604451 268 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 AC092807.2-201ENST00000609367 243 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 AC087588.2-201ENST00000617667 426 ntBASIC-1.57□□□□□ -2.66
HIST1H1DP16402 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.57□□□□□ -2.66
HIST1H1DP16402 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 SNORA69-201ENST00000383895 132 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 MT-TY-201ENST00000387409 66 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 RNA5SP237-201ENST00000410414 113 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 RNA5SP261-201ENST00000410536 106 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 RNU2-61P-201ENST00000411069 191 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 MTND3P23-201ENST00000431980 347 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 RNU6-625P-201ENST00000459412 107 ntBASIC-1.58□□□□□ -2.66
HIST1H1DP16402 RNU6-500P-201ENST00000362349 107 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 SNORD113-7-201ENST00000363762 77 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 RNU4-16P-201ENST00000364737 141 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 SNORD114-29-201ENST00000364819 70 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 RNY4P3-201ENST00000365254 95 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 RNU6-456P-201ENST00000384493 107 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 AL603914.1-201ENST00000401964 204 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 RNU6-195P-201ENST00000411352 109 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.59□□□□□ -2.66
HIST1H1DP16402 AP000533.3-201ENST00000447704 118 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.59□□□□□ -2.66
HIST1H1DP16402 RNU6-531P-201ENST00000516694 104 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 AC141846.1-201ENST00000568348 142 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 MIR7844-201ENST00000616161 122 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 uc_338.10-201ENST00000621872 182 ntBASIC-1.59□□□□□ -2.66
HIST1H1DP16402 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 RNU6-192P-201ENST00000391253 100 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 RNU4-55P-201ENST00000410731 137 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 RPL30P15-201ENST00000457129 321 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 RNA5SP395-201ENST00000516567 118 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 RNA5SP33-201ENST00000516687 98 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 MIR548AE1-201ENST00000583292 70 ntBASIC-1.6□□□□□ -2.67
HIST1H1DP16402 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 AC084290.1-201ENST00000434995 374 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 TPTE2P5-203ENST00000458118 728 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.61□□□□□ -2.67
HIST1H1DP16402 SNORA19.2-201ENST00000516013 114 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 MIR5696-201ENST00000578474 85 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 AC245014.2-201ENST00000603689 287 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 MIR382-201ENST00000637119 76 ntBASIC-1.61□□□□□ -2.67
HIST1H1DP16402 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 RNU6-10P-201ENST00000384036 107 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 RNU6-790P-201ENST00000384479 105 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 AL031003.1-201ENST00000404229 172 ntBASIC-1.62□□□□□ -2.67
HIST1H1DP16402 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms