Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORA36B-201ENST00000410438 131 ntBASIC0.3□□□□□ -2.36
NCK1P16333 RNA5SP127-201ENST00000411051 133 ntBASIC0.3□□□□□ -2.36
NCK1P16333 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
NCK1P16333 SNORD11-201ENST00000459124 84 ntBASIC0.3□□□□□ -2.36
NCK1P16333 RNU6-977P-201ENST00000516411 103 ntBASIC0.3□□□□□ -2.36
NCK1P16333 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
NCK1P16333 AC012433.1-201ENST00000588916 398 ntBASIC0.3□□□□□ -2.36
NCK1P16333 AL355297.3-201ENST00000604082 446 ntBASIC0.3□□□□□ -2.36
NCK1P16333 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.3□□□□□ -2.36
NCK1P16333 MIR18A-201ENST00000362310 71 ntBASIC0.29□□□□□ -2.36
NCK1P16333 Y_RNA.115-201ENST00000363272 98 ntBASIC0.29□□□□□ -2.36
NCK1P16333 AC107297.1-201ENST00000459991 176 ntBASIC0.29□□□□□ -2.36
NCK1P16333 SNORA40.14-201ENST00000516543 86 ntBASIC0.29□□□□□ -2.36
NCK1P16333 RNU6-699P-201ENST00000517081 110 ntBASIC0.29□□□□□ -2.36
NCK1P16333 RNU7-181P-201ENST00000517234 74 ntBASIC0.29□□□□□ -2.36
NCK1P16333 Y_RNA.458-201ENST00000384240 102 ntBASIC0.28□□□□□ -2.36
NCK1P16333 Y_RNA.526-201ENST00000384572 110 ntBASIC0.28□□□□□ -2.36
NCK1P16333 MIR570-201ENST00000384917 97 ntBASIC0.28□□□□□ -2.36
NCK1P16333 MIR520H-201ENST00000385126 88 ntBASIC0.28□□□□□ -2.36
NCK1P16333 RNU6-876P-201ENST00000391295 104 ntBASIC0.28□□□□□ -2.36
NCK1P16333 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.28□□□□□ -2.36
NCK1P16333 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
NCK1P16333 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
NCK1P16333 SNORD116.3-201ENST00000517176 78 ntBASIC0.28□□□□□ -2.36
NCK1P16333 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.28□□□□□ -2.36
NCK1P16333 RPL23AP91-201ENST00000569211 455 ntBASIC0.28□□□□□ -2.36
NCK1P16333 MIR4804-201ENST00000581683 73 ntBASIC0.28□□□□□ -2.36
NCK1P16333 RNU1-115P-201ENST00000365329 160 ntBASIC0.27□□□□□ -2.37
NCK1P16333 SNORA72.4-201ENST00000384174 132 ntBASIC0.27□□□□□ -2.37
NCK1P16333 MIR520F-201ENST00000384824 87 ntBASIC0.27□□□□□ -2.37
NCK1P16333 RNU7-152P-201ENST00000458982 64 ntBASIC0.27□□□□□ -2.37
NCK1P16333 RNU7-110P-201ENST00000516891 62 ntBASIC0.27□□□□□ -2.37
NCK1P16333 RNA5SP330-201ENST00000517096 96 ntBASIC0.27□□□□□ -2.37
NCK1P16333 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.27□□□□□ -2.37
NCK1P16333 RNU6-144P-201ENST00000383951 107 ntBASIC0.26□□□□□ -2.37
NCK1P16333 Y_RNA.463-201ENST00000384271 102 ntBASIC0.26□□□□□ -2.37
NCK1P16333 RNU6-125P-201ENST00000384505 107 ntBASIC0.26□□□□□ -2.37
NCK1P16333 SNORD72-201ENST00000390994 80 ntBASIC0.26□□□□□ -2.37
NCK1P16333 RNY4P36-201ENST00000391116 96 ntBASIC0.26□□□□□ -2.37
NCK1P16333 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.26□□□□□ -2.37
NCK1P16333 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.26□□□□□ -2.37
NCK1P16333 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.26□□□□□ -2.37
NCK1P16333 RNU7-56P-201ENST00000458744 62 ntBASIC0.26□□□□□ -2.37
NCK1P16333 RNU7-141P-201ENST00000459304 62 ntBASIC0.26□□□□□ -2.37
NCK1P16333 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
NCK1P16333 MIR3612-201ENST00000579753 87 ntBASIC0.26□□□□□ -2.37
NCK1P16333 RPS29P30-201ENST00000600975 111 ntBASIC0.26□□□□□ -2.37
NCK1P16333 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-34-201ENST00000362441 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-12-201ENST00000362583 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-29-201ENST00000362834 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-9-201ENST00000362912 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-21-201ENST00000362963 81 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-14-201ENST00000363090 81 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-13-201ENST00000363358 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-41-201ENST00000363608 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-11-201ENST00000363616 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-5-201ENST00000363633 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-39-201ENST00000363694 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-4-201ENST00000363810 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-16-201ENST00000363887 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-6-201ENST00000363942 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-42-201ENST00000364273 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 Y_RNA.248-201ENST00000364501 109 ntBASIC0.25□□□□□ -2.37
NCK1P16333 Y_RNA.259-201ENST00000364619 101 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-15-201ENST00000364809 81 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-1-201ENST00000364961 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-26-201ENST00000365067 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-10-201ENST00000365073 81 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-43-201ENST00000365503 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-36-201ENST00000365629 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 RNY1P8-201ENST00000383970 114 ntBASIC0.25□□□□□ -2.37
NCK1P16333 AC096644.2-201ENST00000429278 159 ntBASIC0.25□□□□□ -2.37
NCK1P16333 AC098614.3-201ENST00000438957 440 ntBASIC0.25□□□□□ -2.37
NCK1P16333 AC023449.1-201ENST00000454464 154 ntBASIC0.25□□□□□ -2.37
NCK1P16333 MIR18B-201ENST00000454574 71 ntBASIC0.25□□□□□ -2.37
NCK1P16333 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.25□□□□□ -2.37
NCK1P16333 U8.20-201ENST00000459445 131 ntBASIC0.25□□□□□ -2.37
NCK1P16333 LARP7P1-201ENST00000605576 316 ntBASIC0.25□□□□□ -2.37
NCK1P16333 SNORD115-40-201ENST00000606510 82 ntBASIC0.25□□□□□ -2.37
NCK1P16333 AC022140.2-201ENST00000623500 188 ntBASIC0.25□□□□□ -2.37
NCK1P16333 Y_RNA.39-201ENST00000362620 98 ntBASIC0.24□□□□□ -2.37
NCK1P16333 Y_RNA.187-201ENST00000363918 113 ntBASIC0.24□□□□□ -2.37
NCK1P16333 Y_RNA.251-201ENST00000364551 99 ntBASIC0.24□□□□□ -2.37
NCK1P16333 Y_RNA.384-201ENST00000383909 102 ntBASIC0.24□□□□□ -2.37
NCK1P16333 Y_RNA.439-201ENST00000384119 94 ntBASIC0.24□□□□□ -2.37
NCK1P16333 RNU6-21P-201ENST00000384710 107 ntBASIC0.24□□□□□ -2.37
NCK1P16333 SNORD100-201ENST00000408573 76 ntBASIC0.24□□□□□ -2.37
NCK1P16333 AL358176.2-201ENST00000425769 204 ntBASIC0.24□□□□□ -2.37
NCK1P16333 AC087499.4-201ENST00000448505 178 ntBASIC0.24□□□□□ -2.37
NCK1P16333 SNORA20.3-201ENST00000516880 132 ntBASIC0.24□□□□□ -2.37
NCK1P16333 Y_RNA.718-201ENST00000517110 102 ntBASIC0.24□□□□□ -2.37
NCK1P16333 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.24□□□□□ -2.37
NCK1P16333 MIR4676-201ENST00000583078 72 ntBASIC0.24□□□□□ -2.37
NCK1P16333 AC005357.1-201ENST00000588399 301 ntBASIC0.24□□□□□ -2.37
NCK1P16333 AL109933.3-201ENST00000619095 188 ntBASIC0.24□□□□□ -2.37
NCK1P16333 AC092634.7-201ENST00000621022 103 ntBASIC0.24□□□□□ -2.37
NCK1P16333 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.24□□□□□ -2.37
NCK1P16333 RNU6-801P-201ENST00000364087 105 ntBASIC0.23□□□□□ -2.37
NCK1P16333 Y_RNA.252-201ENST00000364556 101 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms