Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 RNU6-215P-201ENST00000365169 102 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 AL034345.1-201ENST00000407768 123 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 HMGN2P35-201ENST00000412164 270 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 CALM2P4-201ENST00000430810 426 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 SCARNA15-202ENST00000516881 127 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 RNA5SP437-201ENST00000517249 129 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 SUB1P4-201ENST00000566062 339 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 AC015726.2-201ENST00000620112 122 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 MIR3914-2-201ENST00000637339 95 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
ITGA4P13612 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ITGA4P13612 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
ITGA4P13612 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
ITGA4P13612 RNU6-647P-201ENST00000364243 107 ntBASIC2.47□□□□□ -2.01
ITGA4P13612 RNU6-950P-201ENST00000384651 107 ntBASIC2.47□□□□□ -2.01
ITGA4P13612 MIR520A-201ENST00000384862 85 ntBASIC2.47□□□□□ -2.01
ITGA4P13612 RNU2-7P-201ENST00000410794 178 ntBASIC2.47□□□□□ -2.01
ITGA4P13612 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.47□□□□□ -2.01
ITGA4P13612 RPL23AP63-201ENST00000498752 471 ntBASIC2.47□□□□□ -2.01
ITGA4P13612 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.47□□□□□ -2.01
ITGA4P13612 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ITGA4P13612 RNU6-834P-201ENST00000362367 110 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 Y_RNA.37-201ENST00000362606 108 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 RNU6-112P-201ENST00000363599 104 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 Y_RNA.410-201ENST00000383992 113 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 RNU6-424P-201ENST00000384367 105 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 SNORA40.5-201ENST00000391061 128 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 U8.16-201ENST00000391279 133 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 Y_RNA.630-201ENST00000411370 108 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 snoU13.26-201ENST00000459452 105 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 AC027279.3-201ENST00000625055 122 ntBASIC2.46□□□□□ -2.02
ITGA4P13612 RNU6-1325P-201ENST00000364905 105 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 SNORD58C-201ENST00000365223 64 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 RNU6-1189P-201ENST00000383958 107 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 RNU6-1056P-201ENST00000383996 107 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 RNU6-296P-201ENST00000384608 107 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 RNU6-1031P-201ENST00000384773 107 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 Y_RNA.617-201ENST00000410920 90 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 RNU6-781P-201ENST00000516377 101 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 RNA5SP168-201ENST00000516642 112 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 SNORD36C-201ENST00000516733 66 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 AC108081.1-201ENST00000604358 221 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
ITGA4P13612 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA4P13612 SNORD38C-201ENST00000384381 69 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 RNU6-1064P-201ENST00000410626 104 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 RNA5SP450-201ENST00000411206 102 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 AL021397.1-201ENST00000451806 248 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.44□□□□□ -2.02
ITGA4P13612 RNU7-34P-201ENST00000459394 64 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 snoU13.15-201ENST00000459407 104 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 SCARNA16.3-201ENST00000516595 184 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 RNU7-193P-201ENST00000516723 65 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 SNORA31.25-201ENST00000517242 134 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
ITGA4P13612 SNORA2.2-201ENST00000365473 135 ntBASIC2.43□□□□□ -2.02
ITGA4P13612 RNU6-938P-201ENST00000411285 103 ntBASIC2.43□□□□□ -2.02
ITGA4P13612 MTND5P34-201ENST00000568888 325 ntBASIC2.43□□□□□ -2.02
ITGA4P13612 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ITGA4P13612 AL391516.1-201ENST00000554380 2449 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ITGA4P13612 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ITGA4P13612 RNU6-476P-201ENST00000384726 107 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.42□□□□□ -2.02
ITGA4P13612 RN7SKP19-201ENST00000516016 252 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 RNU7-12P-201ENST00000516030 62 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 SNORD33.1-201ENST00000516213 88 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 RNU6-919P-201ENST00000516731 104 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 IGKV1-22-201ENST00000524313 326 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 AP003484.1-201ENST00000530974 250 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.42□□□□□ -2.02
ITGA4P13612 MIR6129-201ENST00000616087 109 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.42□□□□□ -2.02
ITGA4P13612 U6.95-201ENST00000636931 70 ntBASIC2.42□□□□□ -2.02
ITGA4P13612 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ITGA4P13612 RNU6-1144P-201ENST00000384247 104 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 RNU6-429P-201ENST00000384582 108 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 AL035461.1-201ENST00000421490 332 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 AC015922.2-201ENST00000435593 184 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.41□□□□□ -2.02
ITGA4P13612 MIR4709-201ENST00000577272 72 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 MIR4529-201ENST00000578110 78 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.41□□□□□ -2.02
ITGA4P13612 AC021506.2-201ENST00000612354 169 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 U1.36-201ENST00000620684 176 ntBASIC2.41□□□□□ -2.02
ITGA4P13612 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ITGA4P13612 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
ITGA4P13612 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
ITGA4P13612 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ITGA4P13612 RNU6-833P-201ENST00000363486 107 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms