Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNY1P8-201ENST00000383970 114 ntBASIC0.28□□□□□ -2.36
CD28P10747 Y_RNA.428-201ENST00000384078 102 ntBASIC0.28□□□□□ -2.36
CD28P10747 SNORA72.4-201ENST00000384174 132 ntBASIC0.28□□□□□ -2.36
CD28P10747 MIR1197-201ENST00000408818 88 ntBASIC0.28□□□□□ -2.36
CD28P10747 SNORA36B-201ENST00000410438 131 ntBASIC0.28□□□□□ -2.36
CD28P10747 RNA5SP222-201ENST00000411039 105 ntBASIC0.28□□□□□ -2.36
CD28P10747 RNU6-847P-201ENST00000411115 108 ntBASIC0.28□□□□□ -2.36
CD28P10747 AC098614.3-201ENST00000438957 440 ntBASIC0.28□□□□□ -2.36
CD28P10747 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.28□□□□□ -2.36
CD28P10747 RNU7-141P-201ENST00000459304 62 ntBASIC0.28□□□□□ -2.36
CD28P10747 AC010655.3-201ENST00000478818 450 ntBASIC0.28□□□□□ -2.36
CD28P10747 RNU6-1007P-201ENST00000516586 107 ntBASIC0.28□□□□□ -2.36
CD28P10747 SNORD116.3-201ENST00000517176 78 ntBASIC0.28□□□□□ -2.36
CD28P10747 RNU7-181P-201ENST00000517234 74 ntBASIC0.28□□□□□ -2.36
CD28P10747 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.28□□□□□ -2.36
CD28P10747 Z83818.1-201ENST00000603584 150 ntBASIC0.28□□□□□ -2.36
CD28P10747 AC011373.1-201ENST00000607270 237 ntBASIC0.28□□□□□ -2.36
CD28P10747 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.28□□□□□ -2.36
CD28P10747 MTND4LP32-201ENST00000636111 270 ntBASIC0.28□□□□□ -2.36
CD28P10747 Y_RNA.30-201ENST00000362572 97 ntBASIC0.27□□□□□ -2.37
CD28P10747 RNU6-801P-201ENST00000364087 105 ntBASIC0.27□□□□□ -2.37
CD28P10747 Y_RNA.252-201ENST00000364556 101 ntBASIC0.27□□□□□ -2.37
CD28P10747 RNU6-125P-201ENST00000384505 107 ntBASIC0.27□□□□□ -2.37
CD28P10747 RNU2-14P-201ENST00000411053 191 ntBASIC0.27□□□□□ -2.37
CD28P10747 RBMX2P4-201ENST00000441256 376 ntBASIC0.27□□□□□ -2.37
CD28P10747 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
CD28P10747 SCARNA8-201ENST00000515924 131 ntBASIC0.27□□□□□ -2.37
CD28P10747 RNU4-77P-201ENST00000516692 156 ntBASIC0.27□□□□□ -2.37
CD28P10747 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
CD28P10747 AC005357.1-201ENST00000588399 301 ntBASIC0.27□□□□□ -2.37
CD28P10747 AC012433.1-201ENST00000588916 398 ntBASIC0.27□□□□□ -2.37
CD28P10747 AC099654.14-201ENST00000638599 341 ntBASIC0.27□□□□□ -2.37
CD28P10747 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CD28P10747 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
CD28P10747 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
CD28P10747 RNA5SP457-201ENST00000363657 124 ntBASIC0.26□□□□□ -2.37
CD28P10747 Y_RNA.187-201ENST00000363918 113 ntBASIC0.26□□□□□ -2.37
CD28P10747 MIR802-201ENST00000390235 94 ntBASIC0.26□□□□□ -2.37
CD28P10747 AC244023.1-201ENST00000426884 112 ntBASIC0.26□□□□□ -2.37
CD28P10747 snoU13.21-201ENST00000459368 105 ntBASIC0.26□□□□□ -2.37
CD28P10747 FGF7P4-201ENST00000509595 295 ntBASIC0.26□□□□□ -2.37
CD28P10747 RNU7-110P-201ENST00000516891 62 ntBASIC0.26□□□□□ -2.37
CD28P10747 Y_RNA.713-201ENST00000517013 96 ntBASIC0.26□□□□□ -2.37
CD28P10747 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.26□□□□□ -2.37
CD28P10747 RPL23AP91-201ENST00000569211 455 ntBASIC0.26□□□□□ -2.37
CD28P10747 MIR3145-201ENST00000580727 82 ntBASIC0.26□□□□□ -2.37
CD28P10747 AC242498.1-201ENST00000604134 111 ntBASIC0.26□□□□□ -2.37
CD28P10747 AL021707.8-201ENST00000609428 183 ntBASIC0.26□□□□□ -2.37
CD28P10747 AL132765.2-201ENST00000610812 351 ntBASIC0.26□□□□□ -2.37
CD28P10747 uc_338.4-201ENST00000616635 176 ntBASIC0.26□□□□□ -2.37
CD28P10747 AC243994.1-201ENST00000618627 109 ntBASIC0.26□□□□□ -2.37
CD28P10747 AC015726.2-201ENST00000620112 122 ntBASIC0.26□□□□□ -2.37
CD28P10747 AC022140.2-201ENST00000623500 188 ntBASIC0.26□□□□□ -2.37
CD28P10747 AL606534.2-204ENST00000635008 178 ntBASIC0.26□□□□□ -2.37
CD28P10747 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
CD28P10747 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CD28P10747 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
CD28P10747 Y_RNA.142-201ENST00000363491 102 ntBASIC0.25□□□□□ -2.37
CD28P10747 Y_RNA.222-201ENST00000364264 102 ntBASIC0.25□□□□□ -2.37
CD28P10747 SNORA36.2-201ENST00000384004 127 ntBASIC0.25□□□□□ -2.37
CD28P10747 RNU6-1248P-201ENST00000391096 64 ntBASIC0.25□□□□□ -2.37
CD28P10747 MIR1278-201ENST00000408753 81 ntBASIC0.25□□□□□ -2.37
CD28P10747 Y_RNA.619-201ENST00000410951 90 ntBASIC0.25□□□□□ -2.37
CD28P10747 snoU13.16-201ENST00000459350 104 ntBASIC0.25□□□□□ -2.37
CD28P10747 MIR4804-201ENST00000581683 73 ntBASIC0.25□□□□□ -2.37
CD28P10747 AP000753.3-201ENST00000604083 169 ntBASIC0.25□□□□□ -2.37
CD28P10747 LARP7P1-201ENST00000605576 316 ntBASIC0.25□□□□□ -2.37
CD28P10747 SNORD58B-201ENST00000607313 66 ntBASIC0.25□□□□□ -2.37
CD28P10747 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
CD28P10747 Y_RNA.70-201ENST00000362886 110 ntBASIC0.24□□□□□ -2.37
CD28P10747 RNU6-934P-201ENST00000365154 107 ntBASIC0.24□□□□□ -2.37
CD28P10747 Y_RNA.383-201ENST00000383855 97 ntBASIC0.24□□□□□ -2.37
CD28P10747 RNU6-937P-201ENST00000384325 106 ntBASIC0.24□□□□□ -2.37
CD28P10747 SNORA26.5-201ENST00000391215 123 ntBASIC0.24□□□□□ -2.37
CD28P10747 BTF3P11-201ENST00000426582 477 ntBASIC0.24□□□□□ -2.37
CD28P10747 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.24□□□□□ -2.37
CD28P10747 AL160004.2-201ENST00000432935 350 ntBASIC0.24□□□□□ -2.37
CD28P10747 U8.20-201ENST00000459445 131 ntBASIC0.24□□□□□ -2.37
CD28P10747 AC091959.1-201ENST00000495857 238 ntBASIC0.24□□□□□ -2.37
CD28P10747 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.24□□□□□ -2.37
CD28P10747 AC084781.2-201ENST00000615568 161 ntBASIC0.24□□□□□ -2.37
CD28P10747 AL109933.3-201ENST00000619095 188 ntBASIC0.24□□□□□ -2.37
CD28P10747 Y_RNA.5-201ENST00000362334 102 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-34-201ENST00000362441 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-12-201ENST00000362583 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 Y_RNA.39-201ENST00000362620 98 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-29-201ENST00000362834 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-9-201ENST00000362912 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-21-201ENST00000362963 81 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-14-201ENST00000363090 81 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-13-201ENST00000363358 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-41-201ENST00000363608 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-11-201ENST00000363616 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-5-201ENST00000363633 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-39-201ENST00000363694 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-4-201ENST00000363810 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-16-201ENST00000363887 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-6-201ENST00000363942 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU6-1048P-201ENST00000364054 107 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-42-201ENST00000364273 82 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms