Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.43□□□□□ -2.34
CAPN1P07384 AC005357.1-201ENST00000588399 301 ntBASIC0.43□□□□□ -2.34
CAPN1P07384 AL080274.1-201ENST00000605565 220 ntBASIC0.43□□□□□ -2.34
CAPN1P07384 MIR4791-201ENST00000607666 84 ntBASIC0.43□□□□□ -2.34
CAPN1P07384 Y_RNA.39-201ENST00000362620 98 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 Y_RNA.80-201ENST00000362996 102 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNU4-80P-201ENST00000363200 141 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNA5SP325-201ENST00000363756 130 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNU6-674P-201ENST00000363831 107 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNU6-801P-201ENST00000364087 105 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNU4-50P-201ENST00000364361 141 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 Y_RNA.813-201ENST00000364639 102 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 Y_RNA.286-201ENST00000364813 102 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNU6-1283P-201ENST00000365314 105 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 SNORD63-201ENST00000384262 68 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 Y_RNA.485-201ENST00000384395 102 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 Y_RNA.537-201ENST00000384626 109 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 AL160004.2-201ENST00000432935 350 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 SNORD19B-201ENST00000459623 84 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 RNU4-57P-201ENST00000515980 135 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 Y_RNA.661-201ENST00000516003 99 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 SNORA40.14-201ENST00000516543 86 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.42□□□□□ -2.34
CAPN1P07384 UBE2V2P2-201ENST00000587677 504 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 AC006441.5-201ENST00000612680 209 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 AL138825.1-201ENST00000618587 192 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 AL606534.2-204ENST00000635008 178 ntBASIC0.42□□□□□ -2.34
CAPN1P07384 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.41□□□□□ -2.34
CAPN1P07384 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CAPN1P07384 MIR377-201ENST00000362145 69 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 Y_RNA.5-201ENST00000362334 102 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 Y_RNA.143-201ENST00000363520 106 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 Y_RNA.252-201ENST00000364556 101 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 RNU1-115P-201ENST00000365329 160 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 Y_RNA.376-201ENST00000365638 108 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 Y_RNA.383-201ENST00000383855 97 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 SNORA72.4-201ENST00000384174 132 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 RNU6-21P-201ENST00000384710 107 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 RNU2-13P-201ENST00000515909 113 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 SCARNA8-201ENST00000515924 131 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 MIR2681-201ENST00000581814 105 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 RPS29P30-201ENST00000600975 111 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.41□□□□□ -2.34
CAPN1P07384 Y_RNA.70-201ENST00000362886 110 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 Y_RNA.242-201ENST00000364473 110 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 Y_RNA.439-201ENST00000384119 94 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 MT-TN-201ENST00000387400 73 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 RNU6-205P-201ENST00000390858 107 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 SNORA26.5-201ENST00000391215 123 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 RNU6-130P-201ENST00000411112 103 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 FGF7P4-201ENST00000509595 295 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 PART1_1.1-201ENST00000611761 217 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
CAPN1P07384 RNU6-580P-201ENST00000365159 107 ntBASIC0.39□□□□□ -2.35
CAPN1P07384 RNU6-125P-201ENST00000384505 107 ntBASIC0.39□□□□□ -2.35
CAPN1P07384 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.39□□□□□ -2.35
CAPN1P07384 U8.20-201ENST00000459445 131 ntBASIC0.39□□□□□ -2.35
CAPN1P07384 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
CAPN1P07384 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.39□□□□□ -2.35
CAPN1P07384 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
CAPN1P07384 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.38□□□□□ -2.35
CAPN1P07384 SNORA72.1-201ENST00000363485 129 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 SNORA1.2-201ENST00000365189 134 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 RNY3-201ENST00000365484 102 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 MIR573-201ENST00000384964 99 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 RNU6-847P-201ENST00000411115 108 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 RNU6-177P-201ENST00000411257 104 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 SNORD83.1-201ENST00000411362 77 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 AC090844.1-201ENST00000422019 156 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 POLR2KP2-201ENST00000438155 177 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.38□□□□□ -2.35
CAPN1P07384 AP000753.3-201ENST00000604083 169 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
CAPN1P07384 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.38□□□□□ -2.35
CAPN1P07384 Y_RNA.303-201ENST00000364998 94 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 Y_RNA.418-201ENST00000384029 102 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 Y_RNA.471-201ENST00000384312 102 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 MIR520H-201ENST00000385126 88 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 RNU6-976P-201ENST00000516086 111 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 RNU6-977P-201ENST00000516411 103 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 RNU7-25P-201ENST00000516544 62 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 Y_RNA.713-201ENST00000517013 96 ntBASIC0.37□□□□□ -2.35
CAPN1P07384 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.37□□□□□ -2.35
CAPN1P07384 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CAPN1P07384 Y_RNA.258-201ENST00000364613 105 ntBASIC0.36□□□□□ -2.35
CAPN1P07384 Y_RNA.315-201ENST00000365117 102 ntBASIC0.36□□□□□ -2.35
CAPN1P07384 RNU6-934P-201ENST00000365154 107 ntBASIC0.36□□□□□ -2.35
CAPN1P07384 RNU4-45P-201ENST00000365469 141 ntBASIC0.36□□□□□ -2.35
CAPN1P07384 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CAPN1P07384 Y_RNA.529-201ENST00000384586 119 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms