Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR4790-201ENST00000577799 79 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 MIR4752-201ENST00000579672 72 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 MIR3611-201ENST00000584484 83 ntBASIC-0.39□□□□□ -2.47
HLA-DQB2P05538 SNORD115-34-201ENST00000362441 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-12-201ENST00000362583 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-29-201ENST00000362834 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-9-201ENST00000362912 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-21-201ENST00000362963 81 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-14-201ENST00000363090 81 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-13-201ENST00000363358 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-41-201ENST00000363608 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-11-201ENST00000363616 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-5-201ENST00000363633 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-39-201ENST00000363694 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-4-201ENST00000363810 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-16-201ENST00000363887 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-6-201ENST00000363942 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-42-201ENST00000364273 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-15-201ENST00000364809 81 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-1-201ENST00000364961 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-26-201ENST00000365067 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-10-201ENST00000365073 81 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-43-201ENST00000365503 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-36-201ENST00000365629 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 RNU6-269P-201ENST00000391077 97 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 AL590004.1-201ENST00000405321 300 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD93-201ENST00000408813 74 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 RNU4-83P-201ENST00000410863 133 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 MTND5P5-201ENST00000503764 376 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 RNA5SP47-201ENST00000517230 109 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 MIR4760-201ENST00000585040 80 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 SNORD115-40-201ENST00000606510 82 ntBASIC-0.4□□□□□ -2.47
HLA-DQB2P05538 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU6-161P-201ENST00000363051 106 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU6-626P-201ENST00000363354 107 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU4-75P-201ENST00000364621 146 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU6-740P-201ENST00000364734 105 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 MIR214-201ENST00000385214 110 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 SNORA75.4-201ENST00000391278 119 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU6-602P-201ENST00000411155 105 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 FCF1P9-201ENST00000412546 282 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 MTND4P28-201ENST00000426217 387 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 MTCO1P5-201ENST00000433573 344 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 FCF1P4-201ENST00000448326 183 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU7-165P-201ENST00000458864 60 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 MIR2053-201ENST00000459295 91 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 RNU7-115P-201ENST00000516433 55 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 AP000942.4-201ENST00000604811 241 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 AC022441.3-201ENST00000605737 136 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 Z99129.1-201ENST00000612510 255 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 AC091304.10-201ENST00000641554 121 ntBASIC-0.41□□□□□ -2.48
HLA-DQB2P05538 SNORD12C-201ENST00000386307 89 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 RNU6-373P-201ENST00000411247 98 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 AF228730.4-201ENST00000421457 183 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 SNORD11-201ENST00000459124 84 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 SNORA31.14-201ENST00000516728 116 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 MIR2681-201ENST00000581814 105 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 RNU1-29P-201ENST00000606574 126 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 RN7SKP299-201ENST00000606679 301 ntBASIC-0.42□□□□□ -2.48
HLA-DQB2P05538 POLR2KP2-201ENST00000438155 177 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 SNORD4A-201ENST00000459174 72 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 RPL7P42-201ENST00000481005 679 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 RNU6-135P-201ENST00000516769 101 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 MIR3152-201ENST00000579801 74 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 MIR548AY-201ENST00000617669 107 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 AC092794.2-201ENST00000620933 563 ntBASIC-0.43□□□□□ -2.48
HLA-DQB2P05538 RNU6-674P-201ENST00000363831 107 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 RNU4-50P-201ENST00000364361 141 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 SNORA1.1-201ENST00000364671 133 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 RNU6-593P-201ENST00000364716 112 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 SNORD114-12-201ENST00000365400 75 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 SNORD116-8-201ENST00000384365 95 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 SNORD28-201ENST00000384706 75 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 MIR548O-201ENST00000408583 114 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 RNA5SP163-201ENST00000410304 99 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 AC091951.2-201ENST00000500762 203 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 AC131281.1-201ENST00000522984 164 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 AC138869.1-201ENST00000568623 124 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 AC011476.5-201ENST00000615594 130 ntBASIC-0.44□□□□□ -2.48
HLA-DQB2P05538 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms