| MT2A | P02795 | Y_RNA.603-201 | ENST00000410571 | 108 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-847P-201 | ENST00000411115 | 108 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTND1P21-201 | ENST00000412991 | 285 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTATP6P18-201 | ENST00000417994 | 673 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC244670.1-201 | ENST00000436879 | 112 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTND1P33-201 | ENST00000446251 | 917 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | PLCH1-AS2-201 | ENST00000472913 | 408 nt | TSL 2 BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | SCARNA17.3-201 | ENST00000516381 | 125 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU7-13P-201 | ENST00000516413 | 62 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC023158.1-201 | ENST00000561632 | 1025 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | LARP7P2-201 | ENST00000575306 | 125 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | Six3os1_7.1-201 | ENST00000621512 | 201 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC022418.1-201 | ENST00000624118 | 445 nt | BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | MPP6-209 | ENST00000625307 | 126 nt | TSL 5 BASIC | -1.8 | □□□□□ -2.7 | | |
| MT2A | P02795 | HTN1-201 | ENST00000246896 | 580 nt | APPRIS P1 TSL 1 (best) BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.33-201 | ENST00000362591 | 102 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU4-80P-201 | ENST00000363200 | 141 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-690P-201 | ENST00000365242 | 106 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | SNORA75B-201 | ENST00000384053 | 137 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.440-201 | ENST00000384120 | 114 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR509-1-201 | ENST00000385265 | 94 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR509-2-201 | ENST00000390724 | 91 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-337P-201 | ENST00000391243 | 106 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR208B-201 | ENST00000401172 | 77 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR513C-201 | ENST00000401352 | 84 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR548E-201 | ENST00000408287 | 88 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6ATAC41P-201 | ENST00000408600 | 126 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-602P-201 | ENST00000411155 | 105 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL035461.1-201 | ENST00000421490 | 332 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL355314.1-201 | ENST00000453639 | 316 nt | TSL 5 BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-416P-201 | ENST00000516265 | 103 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-531P-201 | ENST00000516694 | 104 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-1006P-201 | ENST00000516998 | 103 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.721-201 | ENST00000517207 | 102 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR548AG2-201 | ENST00000581228 | 64 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC103591.3-201 | ENST00000608684 | 209 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL359880.1-201 | ENST00000621879 | 266 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC091931.1-201 | ENST00000623488 | 728 nt | BASIC | -1.81 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL589826.1-201 | ENST00000340697 | 249 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.199-201 | ENST00000364014 | 102 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | SNORD115-31-201 | ENST00000365318 | 82 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-641P-201 | ENST00000384006 | 107 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.420-201 | ENST00000384043 | 110 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL590084.2-201 | ENST00000401481 | 382 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.623-201 | ENST00000411128 | 95 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL031274.1-201 | ENST00000450334 | 232 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC010486.2-201 | ENST00000505572 | 483 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | SNORA31.3-201 | ENST00000516029 | 96 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU7-172P-201 | ENST00000517125 | 64 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR5006-201 | ENST00000583027 | 110 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.802-201 | ENST00000614892 | 130 nt | BASIC | -1.82 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.298-201 | ENST00000364960 | 107 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.519-201 | ENST00000384553 | 102 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR599-201 | ENST00000385069 | 95 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU4-55P-201 | ENST00000410731 | 137 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC104850.1-201 | ENST00000435940 | 476 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | HMGN2P32-201 | ENST00000444648 | 269 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | RPL30P10-201 | ENST00000488148 | 337 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTCO3P39-201 | ENST00000514812 | 518 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC107973.1-201 | ENST00000530249 | 576 nt | TSL 4 BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC090502.2-201 | ENST00000549267 | 280 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC090616.2-202 | ENST00000584248 | 222 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC078880.5-201 | ENST00000617845 | 421 nt | BASIC | -1.83 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-1084P-201 | ENST00000362498 | 107 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.368-201 | ENST00000365547 | 113 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-1310P-201 | ENST00000384153 | 107 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | Y_RNA.528-201 | ENST00000384575 | 108 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-987P-201 | ENST00000384759 | 104 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR617-201 | ENST00000385030 | 97 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC009480.1-201 | ENST00000402410 | 412 nt | TSL 3 BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | CoTC_ribozyme.1-201 | ENST00000408104 | 192 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR548I3-201 | ENST00000408378 | 149 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-141P-201 | ENST00000410499 | 105 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU5A-5P-201 | ENST00000411054 | 116 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-325P-201 | ENST00000411132 | 105 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTATP6P19-201 | ENST00000413797 | 659 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTCO2P27-201 | ENST00000420740 | 428 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MTCO2P11-201 | ENST00000431069 | 680 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC004386.2-201 | ENST00000441858 | 148 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL357793.1-201 | ENST00000448412 | 401 nt | TSL 5 BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | snoU13.10-201 | ENST00000459301 | 103 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC097716.1-201 | ENST00000509136 | 180 nt | TSL 2 BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | RNU6-1315P-201 | ENST00000517187 | 99 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR5693-201 | ENST00000577722 | 73 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC007948.1-201 | ENST00000581632 | 242 nt | TSL 5 BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | MIR548W-201 | ENST00000581970 | 74 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC005520.5-201 | ENST00000613926 | 164 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | ST7-OT4_4.1-201 | ENST00000614993 | 213 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AL078596.1-201 | ENST00000624856 | 447 nt | BASIC | -1.84 | □□□□□ -2.7 | | |
| MT2A | P02795 | AC092608.3-201 | ENST00000625017 | 386 nt | BASIC | -1.84 | □□□□□ -2.7 | | |