Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
DDX58O95786 RNU6-1109P-201ENST00000391187 107 ntBASIC1.23□□□□□ -2.21
DDX58O95786 RNU6-1203P-201ENST00000410703 110 ntBASIC1.23□□□□□ -2.21
DDX58O95786 SNORD123-201ENST00000459473 70 ntBASIC1.23□□□□□ -2.21
DDX58O95786 RPS29P1-201ENST00000465274 159 ntBASIC1.23□□□□□ -2.21
DDX58O95786 SERF1AP1-201ENST00000514575 187 ntBASIC1.23□□□□□ -2.21
DDX58O95786 RNU6-1338P-201ENST00000516328 91 ntBASIC1.23□□□□□ -2.21
DDX58O95786 AL442663.2-201ENST00000554385 511 ntBASIC1.23□□□□□ -2.21
DDX58O95786 MIR4724-201ENST00000579485 89 ntBASIC1.23□□□□□ -2.21
DDX58O95786 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
DDX58O95786 MIR3192-201ENST00000584920 77 ntBASIC1.23□□□□□ -2.21
DDX58O95786 AC008507.4-201ENST00000585464 127 ntBASIC1.23□□□□□ -2.21
DDX58O95786 AC022140.2-201ENST00000623500 188 ntBASIC1.23□□□□□ -2.21
DDX58O95786 snoU18.1-201ENST00000629629 71 ntBASIC1.23□□□□□ -2.21
DDX58O95786 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
DDX58O95786 Y_RNA.242-201ENST00000364473 110 ntBASIC1.22□□□□□ -2.21
DDX58O95786 MIR532-201ENST00000385025 91 ntBASIC1.22□□□□□ -2.21
DDX58O95786 SNORD72-201ENST00000390994 80 ntBASIC1.22□□□□□ -2.21
DDX58O95786 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
DDX58O95786 TRBVB-201ENST00000477100 408 ntBASIC1.22□□□□□ -2.21
DDX58O95786 SNORD116-28-201ENST00000516123 91 ntBASIC1.22□□□□□ -2.21
DDX58O95786 Y_RNA.720-201ENST00000517166 92 ntBASIC1.22□□□□□ -2.21
DDX58O95786 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.22□□□□□ -2.21
DDX58O95786 MIR4764-201ENST00000580680 88 ntBASIC1.22□□□□□ -2.21
DDX58O95786 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
DDX58O95786 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
DDX58O95786 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
DDX58O95786 RNU6-268P-201ENST00000364174 107 ntBASIC1.21□□□□□ -2.22
DDX58O95786 Y_RNA.326-201ENST00000365176 113 ntBASIC1.21□□□□□ -2.22
DDX58O95786 Y_RNA.512-201ENST00000384518 102 ntBASIC1.21□□□□□ -2.22
DDX58O95786 RNU6-1011P-201ENST00000384668 107 ntBASIC1.21□□□□□ -2.22
DDX58O95786 SNORD11-201ENST00000459124 84 ntBASIC1.21□□□□□ -2.22
DDX58O95786 SNORD79.1-201ENST00000516069 84 ntBASIC1.21□□□□□ -2.22
DDX58O95786 AC015726.2-201ENST00000620112 122 ntBASIC1.21□□□□□ -2.22
DDX58O95786 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
DDX58O95786 RNY1-201ENST00000364228 113 ntBASIC1.2□□□□□ -2.22
DDX58O95786 AC245047.8-201ENST00000456455 284 ntBASIC1.2□□□□□ -2.22
DDX58O95786 RNU7-43P-201ENST00000516554 64 ntBASIC1.2□□□□□ -2.22
DDX58O95786 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
DDX58O95786 AC006006.1-201ENST00000603082 144 ntBASIC1.2□□□□□ -2.22
DDX58O95786 AL049861.1-201ENST00000603130 150 ntBASIC1.2□□□□□ -2.22
DDX58O95786 Y_RNA.812-201ENST00000610788 101 ntBASIC1.2□□□□□ -2.22
DDX58O95786 Y_RNA.784-201ENST00000613803 101 ntBASIC1.2□□□□□ -2.22
DDX58O95786 Pinc.1-201ENST00000616452 154 ntBASIC1.2□□□□□ -2.22
DDX58O95786 Y_RNA.787-201ENST00000616522 101 ntBASIC1.2□□□□□ -2.22
DDX58O95786 Y_RNA.780-201ENST00000617336 101 ntBASIC1.2□□□□□ -2.22
DDX58O95786 Y_RNA.801-201ENST00000619005 101 ntBASIC1.2□□□□□ -2.22
DDX58O95786 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
DDX58O95786 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
DDX58O95786 SNORA25.3-201ENST00000363205 127 ntBASIC1.19□□□□□ -2.22
DDX58O95786 Y_RNA.376-201ENST00000365638 108 ntBASIC1.19□□□□□ -2.22
DDX58O95786 RNU6-1160P-201ENST00000384546 104 ntBASIC1.19□□□□□ -2.22
DDX58O95786 MIR606-201ENST00000384851 96 ntBASIC1.19□□□□□ -2.22
DDX58O95786 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
DDX58O95786 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.19□□□□□ -2.22
DDX58O95786 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
DDX58O95786 RNU7-41P-201ENST00000515917 61 ntBASIC1.19□□□□□ -2.22
DDX58O95786 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.19□□□□□ -2.22
DDX58O95786 AL391903.3-201ENST00000612158 163 ntBASIC1.19□□□□□ -2.22
DDX58O95786 U6.104-201ENST00000637979 90 ntBASIC1.19□□□□□ -2.22
DDX58O95786 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
DDX58O95786 Y_RNA.217-201ENST00000364214 105 ntBASIC1.18□□□□□ -2.22
DDX58O95786 Y_RNA.330-201ENST00000365230 109 ntBASIC1.18□□□□□ -2.22
DDX58O95786 Y_RNA.363-201ENST00000365529 113 ntBASIC1.18□□□□□ -2.22
DDX58O95786 RNU6-1289P-201ENST00000384431 106 ntBASIC1.18□□□□□ -2.22
DDX58O95786 RNA5SP496-201ENST00000391240 109 ntBASIC1.18□□□□□ -2.22
DDX58O95786 MIR1302-6-201ENST00000408466 90 ntBASIC1.18□□□□□ -2.22
DDX58O95786 Y_RNA.641-201ENST00000459414 105 ntBASIC1.18□□□□□ -2.22
DDX58O95786 AC008737.2-201ENST00000599446 118 ntBASIC1.18□□□□□ -2.22
DDX58O95786 AL008718.3-201ENST00000610217 321 ntBASIC1.18□□□□□ -2.22
DDX58O95786 AC022709.1-201ENST00000615967 87 ntBASIC1.18□□□□□ -2.22
DDX58O95786 uc_338.4-201ENST00000616635 176 ntBASIC1.18□□□□□ -2.22
DDX58O95786 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
DDX58O95786 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
DDX58O95786 RNU4-10P-201ENST00000364383 140 ntBASIC1.17□□□□□ -2.22
DDX58O95786 Y_RNA.237-201ENST00000364439 102 ntBASIC1.17□□□□□ -2.22
DDX58O95786 RNU6-1067P-201ENST00000384752 107 ntBASIC1.17□□□□□ -2.22
DDX58O95786 U8.17-201ENST00000391292 132 ntBASIC1.17□□□□□ -2.22
DDX58O95786 AL603910.2-201ENST00000407268 136 ntBASIC1.17□□□□□ -2.22
DDX58O95786 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.17□□□□□ -2.22
DDX58O95786 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
DDX58O95786 RNU7-149P-201ENST00000516739 59 ntBASIC1.17□□□□□ -2.22
DDX58O95786 MIR548AR-201ENST00000582191 57 ntBASIC1.17□□□□□ -2.22
DDX58O95786 PRELID3BP2-201ENST00000605362 201 ntBASIC1.17□□□□□ -2.22
DDX58O95786 Y_RNA.802-201ENST00000614892 130 ntBASIC1.17□□□□□ -2.22
DDX58O95786 MIR103A2-201ENST00000362154 78 ntBASIC1.16□□□□□ -2.22
DDX58O95786 Y_RNA.44-201ENST00000362676 108 ntBASIC1.16□□□□□ -2.22
DDX58O95786 RNA5SP264-201ENST00000363115 107 ntBASIC1.16□□□□□ -2.22
DDX58O95786 Y_RNA.117-201ENST00000363294 101 ntBASIC1.16□□□□□ -2.22
DDX58O95786 RNU6-694P-201ENST00000364071 147 ntBASIC1.16□□□□□ -2.22
DDX58O95786 RNU6-211P-201ENST00000384047 107 ntBASIC1.16□□□□□ -2.22
DDX58O95786 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
DDX58O95786 MIR548J-201ENST00000408833 112 ntBASIC1.16□□□□□ -2.22
DDX58O95786 SNRPGP14-201ENST00000435400 219 ntBASIC1.16□□□□□ -2.22
DDX58O95786 snoU13.25-201ENST00000458945 104 ntBASIC1.16□□□□□ -2.22
DDX58O95786 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.16□□□□□ -2.22
DDX58O95786 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
DDX58O95786 RN7SKP164-201ENST00000516138 266 ntBASIC1.16□□□□□ -2.22
DDX58O95786 RNU7-181P-201ENST00000517234 74 ntBASIC1.16□□□□□ -2.22
DDX58O95786 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms