Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 MIR548O-201ENST00000408583 114 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
RAB3DO95716 MRPS35P2-201ENST00000508242 191 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 RNU6-397P-201ENST00000516226 104 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 RNU6-764P-201ENST00000516396 105 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 RNU6-1007P-201ENST00000516586 107 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 RNU7-149P-201ENST00000516739 59 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 Y_RNA.713-201ENST00000517013 96 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 AC022140.2-201ENST00000623500 188 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 RNU6-899P-201ENST00000363947 107 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
RAB3DO95716 Y_RNA.602-201ENST00000410535 92 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 AC091959.1-201ENST00000495857 238 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 RNU6-1170P-201ENST00000515974 106 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 Y_RNA.666-201ENST00000516187 112 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 MIR4264-201ENST00000583520 66 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 AL049861.1-201ENST00000603130 150 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
RAB3DO95716 RNU6-1205P-201ENST00000363625 106 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 Y_RNA.241-201ENST00000364470 117 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 BTF3P11-201ENST00000426582 477 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 AC236972.2-201ENST00000434979 310 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 HSPE1P25-201ENST00000455484 251 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 RNU7-67P-201ENST00000459003 62 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 Y_RNA.637-201ENST00000459424 114 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 RNU6-958P-201ENST00000516995 106 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 AC007751.1-201ENST00000529260 376 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.31□□□□□ -2.36
RAB3DO95716 CYP3A137P-201ENST00000562436 69 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 MIR4676-201ENST00000583078 72 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 snoU13.31-201ENST00000607291 104 ntBASIC0.31□□□□□ -2.36
RAB3DO95716 Y_RNA.197-201ENST00000364004 102 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 Y_RNA.263-201ENST00000364659 114 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 SNORA24-201ENST00000384096 131 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 Y_RNA.526-201ENST00000384572 110 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 RNU6-1248P-201ENST00000391096 64 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 snoU13.16-201ENST00000459350 104 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 AL359821.1-201ENST00000605519 182 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.3□□□□□ -2.36
RAB3DO95716 AC134878.1-201ENST00000619901 243 ntBASIC0.3□□□□□ -2.36
RAB3DO95716 Y_RNA.242-201ENST00000364473 110 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 RNU6-913P-201ENST00000390913 95 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 RNU6-1009P-201ENST00000390996 107 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 MIR1302-11-201ENST00000408051 138 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 MIR1302-9-201ENST00000408365 138 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 MIR1302-10-201ENST00000408734 138 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.29□□□□□ -2.36
RAB3DO95716 MTCO1P5-201ENST00000433573 344 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 AC092628.1-201ENST00000436250 252 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 AC107297.1-201ENST00000459991 176 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 RNU6-229P-201ENST00000516614 102 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.29□□□□□ -2.36
RAB3DO95716 MIR1302-2-201ENST00000607096 138 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 AL021707.8-201ENST00000609428 183 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 MIR376A1-201ENST00000616574 68 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 MIR6740-201ENST00000618268 113 ntBASIC0.29□□□□□ -2.36
RAB3DO95716 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 Y_RNA.136-201ENST00000363444 102 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 RNU6-144P-201ENST00000383951 107 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 RNU6-938P-201ENST00000411285 103 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.28□□□□□ -2.36
RAB3DO95716 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.28□□□□□ -2.36
RAB3DO95716 RNU6-496P-201ENST00000516145 99 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.28□□□□□ -2.36
RAB3DO95716 MIR4795-201ENST00000584182 89 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 C8orf59P2-201ENST00000603441 271 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 AC013791.1-201ENST00000616619 62 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 uc_338.22-201ENST00000622722 187 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
RAB3DO95716 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-34-201ENST00000362441 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 RNA5SP347-201ENST00000362445 119 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-12-201ENST00000362583 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-29-201ENST00000362834 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-9-201ENST00000362912 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-21-201ENST00000362963 81 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-14-201ENST00000363090 81 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 Y_RNA.105-201ENST00000363182 111 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-13-201ENST00000363358 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-41-201ENST00000363608 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-11-201ENST00000363616 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-5-201ENST00000363633 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-39-201ENST00000363694 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-4-201ENST00000363810 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-16-201ENST00000363887 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-6-201ENST00000363942 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-42-201ENST00000364273 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-15-201ENST00000364809 81 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-1-201ENST00000364961 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-26-201ENST00000365067 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-10-201ENST00000365073 81 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms