Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU7-43P-201ENST00000516554 64 ntBASIC0.94□□□□□ -2.26
CSDE1O75534 AP003733.2-201ENST00000529409 171 ntBASIC0.94□□□□□ -2.26
CSDE1O75534 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
CSDE1O75534 MIR4764-201ENST00000580680 88 ntBASIC0.94□□□□□ -2.26
CSDE1O75534 FAM71BP1-201ENST00000604431 523 ntBASIC0.94□□□□□ -2.26
CSDE1O75534 AL391903.3-201ENST00000612158 163 ntBASIC0.94□□□□□ -2.26
CSDE1O75534 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CSDE1O75534 AC008163.1-202ENST00000636004 2889 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 MIR103A2-201ENST00000362154 78 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 MIR367-201ENST00000362299 68 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 Y_RNA.11-201ENST00000362375 109 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 Y_RNA.64-201ENST00000362845 102 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 snoU2_19.2-201ENST00000363024 80 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 SNORA25.3-201ENST00000363205 127 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 SNORA33.2-201ENST00000365413 134 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 RNU6-326P-201ENST00000365480 107 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 BTF3P11-201ENST00000426582 477 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 AC091959.1-201ENST00000495857 238 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 RNU7-41P-201ENST00000515917 61 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.93□□□□□ -2.26
CSDE1O75534 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.93□□□□□ -2.26
CSDE1O75534 AC008507.4-201ENST00000585464 127 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 MIR6515-201ENST00000619843 57 ntBASIC0.93□□□□□ -2.26
CSDE1O75534 Y_RNA.14-201ENST00000362415 103 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 Y_RNA.153-201ENST00000363615 91 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 RNA5SP48-201ENST00000363969 126 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 RNY1-201ENST00000364228 113 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 Y_RNA.242-201ENST00000364473 110 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 Y_RNA.293-201ENST00000364908 93 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 Y_RNA.330-201ENST00000365230 109 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 RNU6-144P-201ENST00000383951 107 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 RNU6-662P-201ENST00000384253 104 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 AC002429.1-201ENST00000437672 148 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.92□□□□□ -2.26
CSDE1O75534 AC013791.1-201ENST00000616619 62 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 AC015726.2-201ENST00000620112 122 ntBASIC0.92□□□□□ -2.26
CSDE1O75534 Y_RNA.16-201ENST00000362421 102 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 RNU6-1272P-201ENST00000362776 107 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CSDE1O75534 SNORD72-201ENST00000390994 80 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 RNU6-383P-201ENST00000410864 94 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 POLR2J4-204ENST00000418424 324 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 AC005534.2-201ENST00000431047 433 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 MTCYBP6-201ENST00000441810 138 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.91□□□□□ -2.26
CSDE1O75534 MTND5P22-201ENST00000458380 195 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 SNORD11-201ENST00000459124 84 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.91□□□□□ -2.26
CSDE1O75534 MIR5000-201ENST00000577717 103 ntBASIC0.91□□□□□ -2.26
CSDE1O75534 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CSDE1O75534 RNA5SP264-201ENST00000363115 107 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 RNU6-268P-201ENST00000364174 107 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 RNU6-985P-201ENST00000410182 104 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 AC113618.1-201ENST00000416747 285 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 AL731563.1-201ENST00000442202 214 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 RNU7-90P-201ENST00000459216 62 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 Y_RNA.637-201ENST00000459424 114 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 RPS26P48-201ENST00000491713 339 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 SCARNA24.2-201ENST00000516968 130 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.9□□□□□ -2.27
CSDE1O75534 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.9□□□□□ -2.27
CSDE1O75534 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.9□□□□□ -2.27
CSDE1O75534 Pinc.1-201ENST00000616452 154 ntBASIC0.9□□□□□ -2.27
CSDE1O75534 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.9□□□□□ -2.27
CSDE1O75534 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.89□□□□□ -2.27
CSDE1O75534 RNU7-21P-201ENST00000459430 62 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 SNORD124-201ENST00000459577 104 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.89□□□□□ -2.27
CSDE1O75534 RNU6-570P-201ENST00000517051 105 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 MIR5692C2-201ENST00000577959 77 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 MIR4724-201ENST00000579485 89 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 PRELID3BP2-201ENST00000605362 201 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
CSDE1O75534 Y_RNA.84-201ENST00000363011 104 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 RNU6-1227P-201ENST00000383981 107 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 RNU6-713P-201ENST00000384761 107 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 SNORD28B-201ENST00000390993 75 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 AL603910.2-201ENST00000407268 136 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 MIR548AR-201ENST00000582191 57 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 AL049861.1-201ENST00000603130 150 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.88□□□□□ -2.27
CSDE1O75534 MIR4251-201ENST00000635819 61 ntBASIC0.88□□□□□ -2.27
CSDE1O75534 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.88□□□□□ -2.27
CSDE1O75534 RNU6-1067P-201ENST00000384752 107 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 U8.17-201ENST00000391292 132 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 MIR942-201ENST00000401111 86 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 SNRPGP14-201ENST00000435400 219 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 SERF1AP1-201ENST00000514575 187 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 RN7SKP164-201ENST00000516138 266 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 SNORA27.4-201ENST00000516650 95 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
CSDE1O75534 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
CSDE1O75534 MIR570-201ENST00000384917 97 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms