Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 Y_RNA.508-201ENST00000384502 114 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 SNORA8.3-201ENST00000384679 139 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 SNORA67.5-201ENST00000391036 107 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 MTCYBP9-201ENST00000431021 303 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 AC245047.8-201ENST00000456455 284 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 SNORD123-201ENST00000459473 70 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 SNORA31.4-201ENST00000516049 129 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
XRCC3O43542 RNU4-10P-201ENST00000364383 140 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 RNU6-1138P-201ENST00000365359 106 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 Y_RNA.556-201ENST00000384677 113 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 MIR626-201ENST00000385032 94 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 RNU6-651P-201ENST00000411040 105 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 SNORD77.4-201ENST00000516158 81 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 RNU7-149P-201ENST00000516739 59 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 MIR3192-201ENST00000584920 77 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 AC012433.1-201ENST00000588916 398 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 AC006006.1-201ENST00000603082 144 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 Pinc.1-201ENST00000616452 154 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 AC099654.10-201ENST00000640395 161 ntBASIC1.16□□□□□ -2.22
XRCC3O43542 Y_RNA.327-201ENST00000365201 102 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 Y_RNA.352-201ENST00000365439 102 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 MIR520C-201ENST00000385005 87 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 MIR568-201ENST00000385036 95 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 snoU13.25-201ENST00000458945 104 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
XRCC3O43542 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AC100767.1-201ENST00000528178 123 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.23
XRCC3O43542 MIR4764-201ENST00000580680 88 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AL049861.1-201ENST00000603130 150 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 PRELID3BP2-201ENST00000605362 201 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AL022345.2-201ENST00000606307 135 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AL391903.3-201ENST00000612158 163 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
XRCC3O43542 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
XRCC3O43542 Y_RNA.24-201ENST00000362508 103 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 Y_RNA.288-201ENST00000364854 92 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 Y_RNA.355-201ENST00000365462 98 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 Y_RNA.590-201ENST00000410140 107 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 SNORD127-201ENST00000458892 86 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 RN7SKP164-201ENST00000516138 266 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 AL353621.2-201ENST00000605340 133 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
XRCC3O43542 RNU6-60P-201ENST00000364792 103 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
XRCC3O43542 RNU6-910P-201ENST00000390844 107 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 MIR1302-3-201ENST00000408128 138 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 SNORD116-28-201ENST00000516123 91 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 Y_RNA.679-201ENST00000516416 91 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 BX284668.6-201ENST00000606899 438 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.13□□□□□ -2.23
XRCC3O43542 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.13□□□□□ -2.23
XRCC3O43542 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
XRCC3O43542 Y_RNA.229-201ENST00000364347 113 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 Y_RNA.304-201ENST00000365011 112 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 Y_RNA.562-201ENST00000384695 113 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 Y_RNA.587-201ENST00000391210 103 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 U8.17-201ENST00000391292 132 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 RNU2-38P-201ENST00000410856 79 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 RNU7-41P-201ENST00000515917 61 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 AP003716.2-201ENST00000528260 108 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 MIR4662B-201ENST00000579498 81 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 MIR548AR-201ENST00000582191 57 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 AL645939.4-201ENST00000604495 135 ntBASIC1.12□□□□□ -2.23
XRCC3O43542 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
XRCC3O43542 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 Y_RNA.572-201ENST00000384757 98 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 MIR548H3-201ENST00000408771 118 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 RNU4-57P-201ENST00000515980 135 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 Y_RNA.668-201ENST00000516233 93 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 RNU6-126P-201ENST00000516685 103 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 MIR4643-201ENST00000577473 78 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
XRCC3O43542 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
XRCC3O43542 Y_RNA.547-201ENST00000384654 119 ntBASIC1.1□□□□□ -2.23
XRCC3O43542 MIR518E-201ENST00000385252 88 ntBASIC1.1□□□□□ -2.23
XRCC3O43542 SNORD28B-201ENST00000390993 75 ntBASIC1.1□□□□□ -2.23
XRCC3O43542 RNU6-1132P-201ENST00000459214 107 ntBASIC1.1□□□□□ -2.23
XRCC3O43542 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.1□□□□□ -2.23
XRCC3O43542 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
XRCC3O43542 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms