Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 RNU6-144P-201ENST00000383951 107 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 Y_RNA.416-201ENST00000384014 113 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 SNORD41-201ENST00000386967 70 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAFD1O14545 RPL39P38-201ENST00000467018 153 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 MTND1P19-201ENST00000511780 315 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 Y_RNA.714-201ENST00000517065 90 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 AC090142.3-201ENST00000519012 385 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 AC090049.2-201ENST00000550377 109 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 Y_RNA.802-201ENST00000614892 130 ntBASIC1.14□□□□□ -2.23
TRAFD1O14545 Y_RNA.122-201ENST00000363331 96 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 Y_RNA.193-201ENST00000363979 102 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 Y_RNA.352-201ENST00000365439 102 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 AL451046.2-201ENST00000403074 277 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 RNU6-322P-201ENST00000516010 103 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 RNY3P16-201ENST00000516338 101 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 SNORA18.7-201ENST00000516910 131 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 MIR3664-201ENST00000579074 99 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 MIR3128-201ENST00000581957 66 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 AC008507.4-201ENST00000585464 127 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 U4.1-201ENST00000620349 87 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
TRAFD1O14545 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAFD1O14545 Y_RNA.144-201ENST00000363521 113 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 SNORA2.2-201ENST00000365473 135 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 SNORA8.3-201ENST00000384679 139 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 MIR452-201ENST00000385020 85 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 MIR653-201ENST00000385279 96 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 MT-TT-201ENST00000387460 66 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TRAFD1O14545 RNU6-907P-201ENST00000390924 102 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAFD1O14545 AC245047.8-201ENST00000456455 284 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 Y_RNA.668-201ENST00000516233 93 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAFD1O14545 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 MIR3149-201ENST00000584629 83 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 AL513534.2-201ENST00000603836 250 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 AC062037.2-201ENST00000610137 73 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 7SK.10-201ENST00000621414 298 ntBASIC1.12□□□□□ -2.23
TRAFD1O14545 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAFD1O14545 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAFD1O14545 MIR337-201ENST00000362281 93 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.4-201ENST00000362333 112 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.60-201ENST00000362831 98 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.164-201ENST00000363709 102 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.229-201ENST00000364347 113 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.269-201ENST00000364685 89 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 RNU6-702P-201ENST00000364982 107 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.307-201ENST00000365022 117 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.336-201ENST00000365307 109 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.556-201ENST00000384677 113 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 RNA5SP247-201ENST00000411181 105 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAFD1O14545 SNORD2.1-201ENST00000458762 69 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 RNU7-149P-201ENST00000516739 59 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 RNU6-453P-201ENST00000516819 85 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 AC100767.1-201ENST00000528178 123 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 uc_338.4-201ENST00000616635 176 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 AC015726.2-201ENST00000620112 122 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 AL365265.1-201ENST00000621045 234 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
TRAFD1O14545 Y_RNA.82-201ENST00000363000 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.92-201ENST00000363043 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 RNU6-268P-201ENST00000364174 107 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 snoU2_19.4-201ENST00000364329 80 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.235-201ENST00000364412 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.306-201ENST00000365015 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.312-201ENST00000365089 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.322-201ENST00000365151 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.350-201ENST00000365409 98 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 RNU6-442P-201ENST00000383968 104 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 RNU6-463P-201ENST00000384340 107 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.539-201ENST00000384635 107 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 MIR136-201ENST00000385207 82 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 HMGN2P32-201ENST00000444648 269 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 AC023449.1-201ENST00000454464 154 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.650-201ENST00000459002 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 SCARNA8-201ENST00000515924 131 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.777-201ENST00000516982 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.771-201ENST00000598668 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 GHRLOS.1-201ENST00000610995 70 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Pinc.1-201ENST00000616452 154 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 Y_RNA.789-201ENST00000622480 102 ntBASIC1.1□□□□□ -2.23
TRAFD1O14545 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAFD1O14545 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TRAFD1O14545 Y_RNA.292-201ENST00000364904 97 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms