Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
CUX2O14529 RNU7-115P-201ENST00000516433 55 ntBASIC0.67□□□□□ -2.3
CUX2O14529 Y_RNA.713-201ENST00000517013 96 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
CUX2O14529 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
CUX2O14529 MIR1302-1-201ENST00000637932 143 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AC134026.1-201ENST00000623249 2239 ntBASIC0.66□□□□□ -2.3
CUX2O14529 SNORA9.1-201ENST00000362412 131 ntBASIC0.66□□□□□ -2.3
CUX2O14529 Y_RNA.39-201ENST00000362620 98 ntBASIC0.66□□□□□ -2.3
CUX2O14529 Y_RNA.143-201ENST00000363520 106 ntBASIC0.66□□□□□ -2.3
CUX2O14529 RNU6-21P-201ENST00000384710 107 ntBASIC0.66□□□□□ -2.3
CUX2O14529 RNU6-1248P-201ENST00000391096 64 ntBASIC0.66□□□□□ -2.3
CUX2O14529 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
CUX2O14529 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
CUX2O14529 RPS26P5-201ENST00000418544 335 ntBASIC0.66□□□□□ -2.3
CUX2O14529 RNU6-1110P-201ENST00000516462 101 ntBASIC0.66□□□□□ -2.3
CUX2O14529 AL080274.1-201ENST00000605565 220 ntBASIC0.66□□□□□ -2.3
CUX2O14529 AL121655.1-201ENST00000605811 308 ntBASIC0.66□□□□□ -2.3
CUX2O14529 AL138825.1-201ENST00000618587 192 ntBASIC0.66□□□□□ -2.3
CUX2O14529 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CUX2O14529 Y_RNA.80-201ENST00000362996 102 ntBASIC0.65□□□□□ -2.31
CUX2O14529 RNU6-1209P-201ENST00000363655 107 ntBASIC0.65□□□□□ -2.31
CUX2O14529 Y_RNA.485-201ENST00000384395 102 ntBASIC0.65□□□□□ -2.31
CUX2O14529 U8.17-201ENST00000391292 132 ntBASIC0.65□□□□□ -2.31
CUX2O14529 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
CUX2O14529 AL160004.2-201ENST00000432935 350 ntBASIC0.65□□□□□ -2.31
CUX2O14529 AL157398.1-201ENST00000452981 186 ntBASIC0.65□□□□□ -2.31
CUX2O14529 Y_RNA.632-201ENST00000459189 102 ntBASIC0.65□□□□□ -2.31
CUX2O14529 IGLVI-20-201ENST00000519296 130 ntBASIC0.65□□□□□ -2.31
CUX2O14529 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.65□□□□□ -2.31
CUX2O14529 AL355375.2-201ENST00000574825 175 ntBASIC0.65□□□□□ -2.31
CUX2O14529 MIR4300-201ENST00000581016 96 ntBASIC0.65□□□□□ -2.31
CUX2O14529 AC108676.2-201ENST00000605225 163 ntBASIC0.65□□□□□ -2.31
CUX2O14529 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
CUX2O14529 SNORD81.1-201ENST00000363064 77 ntBASIC0.64□□□□□ -2.31
CUX2O14529 SNORA72.1-201ENST00000363485 129 ntBASIC0.64□□□□□ -2.31
CUX2O14529 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
CUX2O14529 RNU6-396P-201ENST00000365369 105 ntBASIC0.64□□□□□ -2.31
CUX2O14529 Y_RNA.370-201ENST00000365589 108 ntBASIC0.64□□□□□ -2.31
CUX2O14529 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
CUX2O14529 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.64□□□□□ -2.31
CUX2O14529 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
CUX2O14529 AC023449.1-201ENST00000454464 154 ntBASIC0.64□□□□□ -2.31
CUX2O14529 SEPT14P8-201ENST00000508026 178 ntBASIC0.64□□□□□ -2.31
CUX2O14529 SNORA40.14-201ENST00000516543 86 ntBASIC0.64□□□□□ -2.31
CUX2O14529 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.64□□□□□ -2.31
CUX2O14529 MIR5188-201ENST00000583467 113 ntBASIC0.64□□□□□ -2.31
CUX2O14529 AC012433.1-201ENST00000588916 398 ntBASIC0.64□□□□□ -2.31
CUX2O14529 AL132765.2-201ENST00000610812 351 ntBASIC0.64□□□□□ -2.31
CUX2O14529 MIR4272-201ENST00000635924 64 ntBASIC0.64□□□□□ -2.31
CUX2O14529 Y_RNA.242-201ENST00000364473 110 ntBASIC0.63□□□□□ -2.31
CUX2O14529 Y_RNA.476-201ENST00000384347 108 ntBASIC0.63□□□□□ -2.31
CUX2O14529 SNORA2B-201ENST00000384583 137 ntBASIC0.63□□□□□ -2.31
CUX2O14529 MTND1P14-201ENST00000427400 950 ntBASIC0.63□□□□□ -2.31
CUX2O14529 AL392103.1-201ENST00000447000 198 ntBASIC0.63□□□□□ -2.31
CUX2O14529 AC087685.1-201ENST00000587507 141 ntBASIC0.63□□□□□ -2.31
CUX2O14529 DEFB117-201ENST00000602356 141 ntBASIC0.63□□□□□ -2.31
CUX2O14529 AC122108.2-201ENST00000611946 526 ntBASIC0.63□□□□□ -2.31
CUX2O14529 AL606534.2-204ENST00000635008 178 ntBASIC0.63□□□□□ -2.31
CUX2O14529 SNORD95.1-201ENST00000364099 68 ntBASIC0.62□□□□□ -2.31
CUX2O14529 Y_RNA.383-201ENST00000383855 97 ntBASIC0.62□□□□□ -2.31
CUX2O14529 SNORD63-201ENST00000384262 68 ntBASIC0.62□□□□□ -2.31
CUX2O14529 Y_RNA.526-201ENST00000384572 110 ntBASIC0.62□□□□□ -2.31
CUX2O14529 SNORA36B-201ENST00000410438 131 ntBASIC0.62□□□□□ -2.31
CUX2O14529 AF228730.4-201ENST00000421457 183 ntBASIC0.62□□□□□ -2.31
CUX2O14529 RNU6-830P-201ENST00000516353 107 ntBASIC0.62□□□□□ -2.31
CUX2O14529 Y_RNA.700-201ENST00000516806 100 ntBASIC0.62□□□□□ -2.31
CUX2O14529 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.61□□□□□ -2.31
CUX2O14529 RNU6-268P-201ENST00000364174 107 ntBASIC0.61□□□□□ -2.31
CUX2O14529 SNORA1.2-201ENST00000365189 134 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RNU6-937P-201ENST00000384325 106 ntBASIC0.61□□□□□ -2.31
CUX2O14529 MIR570-201ENST00000384917 97 ntBASIC0.61□□□□□ -2.31
CUX2O14529 AL590004.1-201ENST00000405321 300 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RNU4-30P-201ENST00000410245 143 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RBMX2P4-201ENST00000441256 376 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RN7SKP164-201ENST00000516138 266 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RPL23AP91-201ENST00000569211 455 ntBASIC0.61□□□□□ -2.31
CUX2O14529 AC104695.3-201ENST00000604052 296 ntBASIC0.61□□□□□ -2.31
CUX2O14529 MIR548AY-201ENST00000617669 107 ntBASIC0.61□□□□□ -2.31
CUX2O14529 AC104985.2-201ENST00000620598 500 ntBASIC0.61□□□□□ -2.31
CUX2O14529 Y_RNA.185-201ENST00000363894 100 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
CUX2O14529 RNY3-201ENST00000365484 102 ntBASIC0.61□□□□□ -2.31
CUX2O14529 SNORD28B-201ENST00000390993 75 ntBASIC0.61□□□□□ -2.31
CUX2O14529 Y_RNA.610-201ENST00000410681 103 ntBASIC0.61□□□□□ -2.31
CUX2O14529 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.61□□□□□ -2.31
CUX2O14529 POLR2KP2-201ENST00000438155 177 ntBASIC0.61□□□□□ -2.31
CUX2O14529 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
CUX2O14529 AC082651.2-201ENST00000496833 166 ntBASIC0.61□□□□□ -2.31
CUX2O14529 SCARNA8-201ENST00000515924 131 ntBASIC0.61□□□□□ -2.31
CUX2O14529 MIR3145-201ENST00000580727 82 ntBASIC0.61□□□□□ -2.31
CUX2O14529 MIR4423-201ENST00000580922 80 ntBASIC0.61□□□□□ -2.31
CUX2O14529 MIR4305-201ENST00000583252 102 ntBASIC0.61□□□□□ -2.31
CUX2O14529 Z83818.1-201ENST00000603584 150 ntBASIC0.61□□□□□ -2.31
CUX2O14529 AC006157.1-201ENST00000611750 366 ntBASIC0.61□□□□□ -2.31
CUX2O14529 MIR6516-201ENST00000630554 81 ntBASIC0.61□□□□□ -2.31
CUX2O14529 Y_RNA.70-201ENST00000362886 110 ntBASIC0.6□□□□□ -2.31
CUX2O14529 Y_RNA.356-201ENST00000365475 113 ntBASIC0.6□□□□□ -2.31
CUX2O14529 Y_RNA.537-201ENST00000384626 109 ntBASIC0.6□□□□□ -2.31
CUX2O14529 Y_RNA.551-201ENST00000384661 102 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms